RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 CSNK1G1Q9HCP0 422 aa13.5□□□□□ -0.25
PRDM2-208ENST00000487453 ASAH2Q9NR71 780 aa13.5□□□□□ -0.25
PRDM2-208ENST00000487453 ASB3Q9Y575 518 aa13.5□□□□□ -0.25
PRDM2-208ENST00000487453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■□□□ 13.6
PRDM2-208ENST00000487453 MYH10P35580 1976 aa13.5□□□□□ -0.25
PRDM2-208ENST00000487453 CLUHO75153 1309 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 GRXCR2A6NFK2 248 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 MBTPS2O43462 519 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 GYPCP04921 128 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 RHOP08100 348 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 POU2F2P09086 479 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 TPM1P09493 284 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 SETSIPP0DME0 302 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 CYP11B1P15538 503 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 FERP16591 822 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 PTPN2P17706 415 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 KRT9P35527 623 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 MTHFRP42898 656 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 SLC5A3P53794 718 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 PDE4CQ08493 712 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 TRIM14Q14142 442 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 CNGA2Q16280 664 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 ASIC2Q16515 512 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 AAK1Q2M2I8 961 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 TAF3Q5VWG9 929 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 SMYD5Q6GMV2 418 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
PRDM2-208ENST00000487453 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 DENND5BQ6ZUT9 1274 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 GET4Q7L5D6 327 aaPredicted RBP13.49□□□□□ -0.25
PRDM2-208ENST00000487453 TMC6Q7Z403 805 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 EPS8L1Q8TE68 723 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 ZNF606Q8WXB4 792 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 BAP1Q92560 729 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 SECISBP2LQ93073 1101 aaKnown RBP13.49□□□□□ -0.25
PRDM2-208ENST00000487453 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 DNMT3BQ9UBC3 853 aaKnown RBP13.49□□□□□ -0.25
PRDM2-208ENST00000487453 CEP83Q9Y592 693 aa13.49□□□□□ -0.25
PRDM2-208ENST00000487453 A0A1W2PQJ5 194 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 GOLGA6L3A6NEY3 463 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
PRDM2-208ENST00000487453 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 CASP14P31944 242 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 KCNQ1P51787 676 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 CYP4A22Q5TCH4 519 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 SFMBT2Q5VUG0 894 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 DENND1BQ6P3S1 775 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 GPRIN1Q7Z2K8 1008 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
PRDM2-208ENST00000487453 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
PRDM2-208ENST00000487453 NUP93Q8N1F7 819 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.48□□□□□ -0.25
PRDM2-208ENST00000487453 MRFAP1L1Q96HT8 127 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 CEP295NLQ96MC4 621 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 NECTIN4Q96NY8 510 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 ZNF334Q9HCZ1 680 aaPredicted RBP13.48□□□□□ -0.25
PRDM2-208ENST00000487453 PNPLA8Q9NP80 782 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 EHD2Q9NZN4 543 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 MYO6Q9UM54 1294 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 FAM50BQ9Y247 325 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 OBSL1O75147 1896 aa13.48□□□□□ -0.25
PRDM2-208ENST00000487453 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 FAM170AA1A519 330 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 TULP2O00295 520 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 RTN3O95197 1032 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 PAPLNO95428 1278 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 MMEP08473 750 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 CFHP08603 1231 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 SP100P23497 879 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 FSHRP23945 695 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 GABRR2P28476 465 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 RGS7P49802 495 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 USP46P62068 366 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 ZBED6P86452 979 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 PUS10Q3MIT2 529 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 PIGZQ86VD9 579 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 LEMD2Q8NC56 503 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 SLC20A1Q8WUM9 679 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 ING5Q8WYH8 240 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 TRMT2BQ96GJ1 504 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 NUCKS1Q9H1E3 243 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 WDR6Q9NNW5 1121 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 ST7Q9NRC1 585 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 SEPT11Q9NVA2 429 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 UXTQ9UBK9 157 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 CAPN11Q9UMQ6 739 aa13.47□□□□□ -0.25
PRDM2-208ENST00000487453 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 MRPS23Q9Y3D9 190 aaKnown RBP13.47□□□□□ -0.25
PRDM2-208ENST00000487453 XIRP2A4UGR9 3374 aa13.46□□□□□ -0.25
PRDM2-208ENST00000487453 A0A1W2PRU2 124 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms