RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 KPNA7A9QM74 516 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 EIF3HO15372 352 aaKnown RBP eCLIP21.37■■□□□ 1.01
HPS3-206ENST00000486530 VPS41P49754 854 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 MRPS6P82932 125 aaKnown RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 OASLQ15646 514 aaKnown RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 SV2CQ496J9 727 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 IZUMO3Q5VZ72 239 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 TWF2Q6IBS0 349 aaKnown RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 SMG8Q8ND04 991 aaKnown RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 STK32AQ8WU08 396 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 SLC4A5Q9BY07 1137 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 BCCIPQ9P287 314 aaKnown RBP eCLIP21.37■■□□□ 1.01
HPS3-206ENST00000486530 PRDM4Q9UKN5 801 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 USP18Q9UMW8 372 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 TRUB2O95900 331 aaKnown RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 ITGAVP06756 1048 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 KCNT1Q5JUK3 1230 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 BBS12Q6ZW61 710 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 TMEM110Q86TL2 294 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 SESTD1Q86VW0 696 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 CMASQ8NFW8 434 aaPredicted RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 SLC35F5Q8WV83 523 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 KBTBD7Q8WVZ9 684 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 CDC42EP4Q9H3Q1 356 aaKnown RBP21.37■■□□□ 1.01
HPS3-206ENST00000486530 GTF2IRD1Q9UHL9 959 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 TRPV2Q9Y5S1 764 aa21.37■■□□□ 1.01
HPS3-206ENST00000486530 CASP8AP2Q9UKL3 1982 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 DPYSL4O14531 572 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 TRPA1O75762 1119 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 RARBP10826 455 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 PDGFRAP16234 1089 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 CCND3P30281 292 aaPredicted RBP21.36■■□□□ 1.01
HPS3-206ENST00000486530 HPDP32754 393 aaPredicted RBP21.36■■□□□ 1.01
HPS3-206ENST00000486530 CHKAP35790 457 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 RGS7P49802 495 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 PMF1Q6P1K2 205 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 OLFML1Q6UWY5 402 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 CXCL17Q6UXB2 119 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 CEP128Q6ZU80 1094 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 RSPH3Q86UC2 560 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 ZDHHC17Q8IUH5 632 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 CRYBG2Q8N1P7 616 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 KCTD6Q8NC69 237 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 RXFP2Q8WXD0 754 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 PGM2Q96G03 612 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 FOXP3Q9BZS1 431 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 SPC25Q9HBM1 224 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 RNF19AQ9NV58 838 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 PCSK1NQ9UHG2 260 aa21.36■■□□□ 1.01
HPS3-206ENST00000486530 NOVA2Q9UNW9 492 aaKnown RBP21.36■■□□□ 1.01
HPS3-206ENST00000486530 NDC80O14777 642 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 ADAMTS4O75173 837 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 ELNP15502 786 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 VEGFBP49765 207 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 LIMS2Q7Z4I7 341 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 APPL2Q8NEU8 664 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 SLC35B2Q8TB61 432 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 TLCD1Q96CP7 247 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 SNX25Q9H3E2 840 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 DPEP3Q9H4B8 488 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 CWC15Q9P013 229 aaKnown RBP21.35■■□□□ 1.01
HPS3-206ENST00000486530 SRRDQ9UH36 339 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 CDY2AQ9Y6F7 541 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 TULP2O00295 520 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 PIK3R2O00459 728 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 DESP17661 470 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 GNL1P36915 607 aaPredicted RBP21.35■■□□□ 1.01
HPS3-206ENST00000486530 BCAT1P54687 386 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 SLC6A3Q01959 620 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 SOX4Q06945 474 aaPredicted RBP21.35■■□□□ 1.01
HPS3-206ENST00000486530 NBPF20Q3BBV1 942 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 TRNP1Q6NT89 227 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 HIBCHQ6NVY1 386 aaPredicted RBP21.35■■□□□ 1.01
HPS3-206ENST00000486530 HAUS1Q96CS2 278 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 PIWIL1Q96J94 861 aaKnown RBP21.35■■□□□ 1.01
HPS3-206ENST00000486530 LRRC4CQ9HCJ2 640 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 CALCOCO1Q9P1Z2 691 aa21.35■■□□□ 1.01
HPS3-206ENST00000486530 SPTLC1O15269 473 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 CST8O60676 142 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 CAND2O75155 1236 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 PRKAR2AP13861 404 aaKnown RBP21.34■■□□□ 1.01
HPS3-206ENST00000486530 LRPAP1P30533 357 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 PPP2R2AP63151 447 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 PDE4CQ08493 712 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 BST2Q10589 180 aaKnown RBP21.34■■□□□ 1.01
HPS3-206ENST00000486530 P3H1Q32P28 736 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 C6orf118Q5T5N4 469 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 ARRDC4Q8NCT1 418 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 KLHDC9Q8NEP7 349 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 CD99L2Q8TCZ2 262 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 HSPH1Q92598 858 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 ZMYND15Q9H091 742 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 RSAD1Q9HA92 442 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 GOLGA2P5Q9HBQ8 144 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 PCDH9Q9HC56 1237 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 CYLDQ9NQC7 956 aa21.34■■□□□ 1.01
HPS3-206ENST00000486530 DNALI1O14645 258 aaPredicted RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 HUS1O60921 280 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 CAPN15O75808 1086 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 RPLP2P05387 115 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms