RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FAM186AA6NE01 2351 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 BIN1O00499 593 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 DCXO43602 365 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 CALUO43852 315 aaPredicted RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 LZTS3O60299 673 aaPredicted RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 EXOC3O60645 756 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 XYLBO75191 536 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 SMC2O95347 1197 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 PRAMEF12O95522 483 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 RHOP08100 348 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 TMEM191BP0C7N4 346 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 HAPLN1P10915 354 aaPredicted RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 TIMP2P16035 220 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 PTPN2P17706 415 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 NR2F2P24468 414 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 CCNE1P24864 410 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 RPL13P26373 211 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 PSMC2P35998 433 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 PPP1R2P41236 205 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 LHX1P48742 406 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 VCPP55072 806 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 WDR4P57081 412 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 PSMC1P62191 440 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 ZXDAP98168 799 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 FKBP3Q00688 224 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 LRRC63Q05C16 580 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 ADCY1Q08828 1119 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 INCA1Q0VD86 236 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 DNAH14Q0VDD8 3507 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 BFSP1Q12934 665 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 DUSP4Q13115 394 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 HTR4Q13639 388 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 PTPN21Q16825 1174 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 DPCR1Q3MIW9 517 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 NAIF1Q69YI7 327 aaPredicted RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 DSTYKQ6XUX3 929 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 INTS8Q75QN2 995 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 GAREM2Q75VX8 874 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 GPRIN1Q7Z2K8 1008 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 GRASPQ7Z6J2 395 aaPredicted RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 FILIP1Q7Z7B0 1213 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 CRYBG2Q8N1P7 616 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 LEMD2Q8NC56 503 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 OLIG1Q8TAK6 271 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 LMO3Q8TAP4 145 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 SHKBP1Q8TBC3 707 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 GPR152Q8TDT2 470 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 TAS1R2Q8TE23 839 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 ING5Q8WYH8 240 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 TAF4BQ92750 862 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 FGF13Q92913 245 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 KAT5Q92993 513 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 SMARCE1Q969G3 411 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 PSMG2Q969U7 264 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 SLC35C1Q96A29 364 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 ITPKCQ96DU7 683 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 CCDC34Q96HJ3 373 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
CUX1-208ENST00000485792 RPGRIP1Q96KN7 1286 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 MYRFLQ96LU7 910 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 IPO9Q96P70 1041 aaKnown RBP6.12□□□□□ -1.43
CUX1-208ENST00000485792 C1QTNF1Q9BXJ1 281 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 KCNK12Q9HB15 430 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 GDE1Q9NZC3 331 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 IL37Q9NZH6 218 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 IGSF9Q9P2J2 1179 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 CKAP5Q14008 2032 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 FAM92AA1XBS5 289 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 GOLGA6L4A6NEF3 574 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 PRR33A8MZF0 331 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 ARNTLO00327 626 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SLC16A3O15427 465 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 CAPN5O15484 640 aaPredicted RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 KINO60870 393 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 HUS1O60921 280 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 LILRA1O75019 489 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 BEST1O76090 585 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 ZIC2O95409 532 aaPredicted RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 TNNC2P02585 160 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 F11P03951 625 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 DLATP10515 647 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 NPR3P17342 541 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 TNNI1P19237 187 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CA8P35219 290 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 ANP32AP39687 249 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 SCTRP47872 440 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 TUFMP49411 452 aaKnown RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 VAMP7P51809 220 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 CDH8P55286 799 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SIGLEC14Q08ET2 396 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 MYO1EQ12965 1108 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 NCOA4Q13772 614 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 NFE2Q16621 373 aaPredicted RBP6.11□□□□□ -1.43
CUX1-208ENST00000485792 SGSM1Q2NKQ1 1148 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 WDR72Q3MJ13 1102 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 OXLD1Q5BKU9 147 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 PPM1LQ5SGD2 360 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 LIN9Q5TKA1 542 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 PARM1Q6UWI2 310 aa6.11□□□□□ -1.43
CUX1-208ENST00000485792 SCARA5Q6ZMJ2 495 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms