RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ZNF606Q8WXB4 792 aa21.08■□□□□ 0.97
COL6A2-208ENST00000485591 NECTIN4Q96NY8 510 aa21.08■□□□□ 0.97
COL6A2-208ENST00000485591 PNPLA8Q9NP80 782 aa21.08■□□□□ 0.97
COL6A2-208ENST00000485591 HCFC1R1Q9NWW0 138 aa21.08■□□□□ 0.97
COL6A2-208ENST00000485591 DNMT3BQ9UBC3 853 aaKnown RBP21.08■□□□□ 0.97
COL6A2-208ENST00000485591 CDH22Q9UJ99 828 aa21.08■□□□□ 0.97
COL6A2-208ENST00000485591 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL6A2-208ENST00000485591 SLC38A8A6NNN8 435 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 MICAL2O94851 1124 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 SETSIPP0DME0 302 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 CYP11B1P15538 503 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 PDE6CP51160 858 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 EPHA5P54756 1037 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 SLC8A3P57103 927 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 TFF2Q03403 129 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 BST2Q10589 180 aaKnown RBP21.07■□□□□ 0.96
COL6A2-208ENST00000485591 CBX2Q14781 532 aaPredicted RBP21.07■□□□□ 0.96
COL6A2-208ENST00000485591 PUS10Q3MIT2 529 aaKnown RBP21.07■□□□□ 0.96
COL6A2-208ENST00000485591 GRASPQ7Z6J2 395 aaPredicted RBP21.07■□□□□ 0.96
COL6A2-208ENST00000485591 DNAJB7Q7Z6W7 309 aaPredicted RBP21.07■□□□□ 0.96
COL6A2-208ENST00000485591 LEMD2Q8NC56 503 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 EPS8L1Q8TE68 723 aa21.07■□□□□ 0.96
COL6A2-208ENST00000485591 AVENQ9NQS1 362 aaPredicted RBP21.07■□□□□ 0.96
COL6A2-208ENST00000485591 LRRC53A6NM62 1247 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 HHLA1C9JL84 531 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 M0QYV0 167 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 GYPCP04921 128 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 HMGA1P17096 107 aaKnown RBP21.06■□□□□ 0.96
COL6A2-208ENST00000485591 ZNF75DP51815 510 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 TRIM14Q14142 442 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 TAF12Q16514 161 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 AAK1Q2M2I8 961 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 DENND5BQ6ZUT9 1274 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 TMC8Q8IU68 726 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 STKLD1Q8NE28 680 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 TRMT2BQ96GJ1 504 aaKnown RBP21.06■□□□□ 0.96
COL6A2-208ENST00000485591 MRFAP1L1Q96HT8 127 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 MYRFLQ96LU7 910 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 CORO1BQ9BR76 489 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 LRRC3Q9BY71 257 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 UBXN6Q9BZV1 441 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 WDR6Q9NNW5 1121 aaKnown RBP21.06■□□□□ 0.96
COL6A2-208ENST00000485591 ASAH2Q9NR71 780 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 EHD2Q9NZN4 543 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 CAPN11Q9UMQ6 739 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 PCDHGC3Q9UN70 934 aa21.06■□□□□ 0.96
COL6A2-208ENST00000485591 CLUHO75153 1309 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 TNFRSF10BO14763 440 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 XPO1O14980 1071 aaKnown RBP21.05■□□□□ 0.96
COL6A2-208ENST00000485591 RHOP08100 348 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 FERP16591 822 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 PDE4CQ08493 712 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 MTMR3Q13615 1198 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 PABPC1LQ4VXU2 614 aaKnown RBP21.05■□□□□ 0.96
COL6A2-208ENST00000485591 PTCRAQ6ISU1 281 aaPredicted RBP21.05■□□□□ 0.96
COL6A2-208ENST00000485591 NOP9Q86U38 636 aaKnown RBP21.05■□□□□ 0.96
COL6A2-208ENST00000485591 NUP93Q8N1F7 819 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 UBA3Q8TBC4 463 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 TTLL2Q9BWV7 592 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 POMKQ9H5K3 350 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 ZNF334Q9HCZ1 680 aaPredicted RBP21.05■□□□□ 0.96
COL6A2-208ENST00000485591 FAM50BQ9Y247 325 aa21.05■□□□□ 0.96
COL6A2-208ENST00000485591 ANAPC1Q9H1A4 1944 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 RTN3O95197 1032 aaPredicted RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 CCDC172P0C7W6 258 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 SSTR3P32745 418 aaPredicted RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 PLA2G4AP47712 749 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 SLC5A3P53794 718 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 NTHL1P78549 312 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 ZBED6P86452 979 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 SMAD2Q15796 467 aaKnown RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 CYP4A22Q5TCH4 519 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 PDZD4Q76G19 769 aaPredicted RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 PIGZQ86VD9 579 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 ZNF677Q86XU0 584 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 HS6ST3Q8IZP7 471 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 ATXN2LQ8WWM7 1075 aaKnown RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 DDX1Q92499 740 aaKnown RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 SECISBP2LQ93073 1101 aaKnown RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 NUCKS1Q9H1E3 243 aaKnown RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 COMMD8Q9NX08 183 aa21.04■□□□□ 0.96
COL6A2-208ENST00000485591 UXTQ9UBK9 157 aaPredicted RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 NOCTQ9UK39 431 aaKnown RBP21.04■□□□□ 0.96
COL6A2-208ENST00000485591 FGF19O95750 216 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 CFHP08603 1231 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 KRT9P35527 623 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 USP46P62068 366 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 PRSS36Q5K4E3 855 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 SFMBT2Q5VUG0 894 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 DENND1BQ6P3S1 775 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 GPRIN1Q7Z2K8 1008 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 ZNF397Q8NF99 534 aaPredicted RBP21.03■□□□□ 0.96
COL6A2-208ENST00000485591 SLC35F5Q8WV83 523 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 IL21Q9HBE4 155 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 IL37Q9NZH6 218 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 AIPL1Q9NZN9 384 aa21.03■□□□□ 0.96
COL6A2-208ENST00000485591 MAGED2Q9UNF1 606 aaPredicted RBP21.03■□□□□ 0.96
COL6A2-208ENST00000485591 LUC7L2Q9Y383 392 aaKnown RBP21.03■□□□□ 0.96
COL6A2-208ENST00000485591 TULP2O00295 520 aa21.02■□□□□ 0.96
COL6A2-208ENST00000485591 ZNF197O14709 1029 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms