RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 ZNF394Q53GI3 561 aa15.56■□□□□ 0.08
TTC3-219ENST00000485402 TMEM270Q6UE05 265 aa15.56■□□□□ 0.08
TTC3-219ENST00000485402 SYDE1Q6ZW31 735 aaPredicted RBP15.56■□□□□ 0.08
TTC3-219ENST00000485402 CLNKQ7Z7G1 428 aa15.56■□□□□ 0.08
TTC3-219ENST00000485402 PPP1R13LQ8WUF5 828 aa15.56■□□□□ 0.08
TTC3-219ENST00000485402 RNPEPQ9H4A4 650 aa15.56■□□□□ 0.08
TTC3-219ENST00000485402 PLXNB2O15031 1838 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 HNRNPDLO14979 420 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 SNUPNO95149 360 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 ESRRAP11474 423 aaPredicted RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 HARSP12081 509 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 GTF2BQ00403 316 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.55■□□□□ 0.082e-6■■■■■ 163.7
TTC3-219ENST00000485402 PPFIBP2Q8ND30 876 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 PYROXD1Q8WU10 500 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 INPP5DQ92835 1189 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 VTI1AQ96AJ9 217 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 SMARCAD1Q9H4L7 1026 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 PDLIM7Q9NR12 457 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 SCOCQ9UIL1 159 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 P4HA2O15460 535 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 AOC2O75106 756 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 SMPD1P17405 629 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 NCKAP1LP55160 1127 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 LIN9Q5TKA1 542 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 MFSD7Q6UXD7 560 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 C3orf62Q6ZUJ4 267 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 TTC7BQ86TV6 843 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 DDX1Q92499 740 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 STRA6Q9BX79 667 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 DHX33Q9H6R0 707 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 UBE4BO95155 1302 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 DYNC1LI2O43237 492 aaPredicted RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 WFS1O76024 890 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 SRGAP2CP0DJJ0 459 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 ARFIP2P53365 341 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 RPL7AP62424 266 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 NFX1Q12986 1120 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 NR1H3Q13133 447 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 THOC5Q13769 683 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 ACSBG2Q5FVE4 666 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 C4orf50Q6ZRC1 276 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 ZCCHC9Q8N567 271 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 DEPTORQ8TB45 409 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 SLCO2A1Q92959 643 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 NIFKQ9BYG3 293 aaKnown RBP15.55■□□□□ 0.08
TTC3-219ENST00000485402 FLRT1Q9NZU1 646 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 PCDHB4Q9Y5E5 795 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 LOXHD1Q8IVV2 1947 aa15.55■□□□□ 0.08
TTC3-219ENST00000485402 PROSCO94903 275 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 KITP10721 976 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
TTC3-219ENST00000485402 ALCAMQ13740 583 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 MAMDC4Q6UXC1 1216 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 PALM2Q8IXS6 379 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 PPP1R16BQ96T49 567 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 TRIM4Q9C037 500 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 ANKFY1Q9P2R3 1169 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 MAPTP10636 758 aaKnown RBP15.54■□□□□ 0.08
TTC3-219ENST00000485402 SKIP12755 728 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 GLRA2P23416 452 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 LRRC36Q1X8D7 754 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 WDR44Q5JSH3 913 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 CENPUQ71F23 418 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 ZNF467Q7Z7K2 595 aaPredicted RBP15.54■□□□□ 0.08
TTC3-219ENST00000485402 RHPN2Q8IUC4 686 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 CCNJLQ8IV13 435 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 WDR60Q8WVS4 1066 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 FAM167AQ96KS9 214 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 TTC1Q99614 292 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 TRIM55Q9BYV6 548 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 TMEM8AQ9HCN3 771 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
TTC3-219ENST00000485402 CCDC22O60826 627 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 TOMM70O94826 608 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 GJB1P08034 283 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 VHLP40337 213 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 TNFAIP2Q03169 654 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 CENPCQ03188 943 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 BRDTQ58F21 947 aaPredicted RBP15.54■□□□□ 0.08
TTC3-219ENST00000485402 PPP1R15BQ5SWA1 713 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 DCUN1D2Q6PH85 259 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 OR6J1Q8NGC5 347 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 PRPF31Q8WWY3 499 aaKnown RBP15.54■□□□□ 0.08
TTC3-219ENST00000485402 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 KATNBL1Q9H079 304 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 EXOC7Q9UPT5 735 aa15.54■□□□□ 0.08
TTC3-219ENST00000485402 PLXNA1Q9UIW2 1896 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 TCEA3O75764 348 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 LGALS2P05162 132 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 WASHC2DQ5SRD0 308 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 ARHGAP39Q9C0H5 1083 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 C17orf75Q9HAS0 396 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 ERAP1Q9NZ08 941 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 MARCOQ9UEW3 520 aaPredicted RBP15.53■□□□□ 0.08
TTC3-219ENST00000485402 ACTL7BQ9Y614 415 aa15.53■□□□□ 0.08
TTC3-219ENST00000485402 DNALI1O14645 258 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms