RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CLSTN3Q9BQT9 956 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 YBX2Q9Y2T7 364 aaKnown RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 WDR27A2RRH5 827 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 OR6C75A6NL08 312 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 CA3P07451 260 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 DNAJB2P25686 324 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PPM1AP35813 382 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 NOP2P46087 812 aaKnown RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 GLUD2P49448 558 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 GPR15P49685 360 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ARPP19P56211 112 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ROR1Q01973 937 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 OGDHQ02218 1023 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 SLC8B1Q6J4K2 584 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 TRNP1Q6NT89 227 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 OLFML1Q6UWY5 402 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 RNF19BQ6ZMZ0 732 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 RHOT2Q8IXI1 618 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 VPS52Q8N1B4 723 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 TXLNBQ8N3L3 684 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 RNF10Q8N5U6 811 aaKnown RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ATAD1Q8NBU5 361 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 C3orf20Q8ND61 904 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 JOSD2Q8TAC2 188 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 STK32AQ8WU08 396 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 C18orf8Q96DM3 657 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 MCRS1Q96EZ8 462 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 TRIM11Q96F44 468 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 NOX5Q96PH1 765 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ZBP1Q9H171 429 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
LRIF1-202ENST00000485275 DNAI1Q9UI46 699 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 HYOU1Q9Y4L1 999 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 PCDHB12Q9Y5F1 795 aa15.34■□□□□ 0.05
LRIF1-202ENST00000485275 COL4A4P53420 1690 aaPredicted RBP15.33■□□□□ 0.04
LRIF1-202ENST00000485275 MTMR11A4FU01 709 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 DNAJB1P25685 340 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 NDUFV1P49821 464 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 ADCY1Q08828 1119 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 TAF5Q15542 800 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 CFAP221Q4G0U5 840 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 PPP1R2P3Q6NXS1 205 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 SCUBE3Q8IX30 993 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 NDRG1Q92597 394 aaKnown RBP15.33■□□□□ 0.04
LRIF1-202ENST00000485275 KHSRPQ92945 711 aaKnown RBP eCLIP15.33■□□□□ 0.047e-7■■□□□ 13.2
LRIF1-202ENST00000485275 AAASQ9NRG9 546 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 MTUS1Q9ULD2 1270 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 BACE2Q9Y5Z0 518 aa15.33■□□□□ 0.04
LRIF1-202ENST00000485275 MYO16Q9Y6X6 1858 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 F8VP50 259 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 ENC1O14682 589 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 LILRB3O75022 631 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 SOAT2O75908 522 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 FTCDO95954 541 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 LCP1P13796 627 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 CPB1P15086 417 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 CTNNB1P35222 781 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 BMPR1AP36894 532 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 NAP1L1P55209 391 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 ADIGQ0VDE8 80 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 GPR17Q13304 367 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 MAPRE1Q15691 268 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 RAB41Q5JT25 222 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 DAB2IPQ5VWQ8 1189 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 SLFN11Q7Z7L1 901 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 SPATA2LQ8IUW3 424 aaPredicted RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 DCP1BQ8IZD4 617 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 IPO4Q8TEX9 1081 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 MCEEQ96PE7 176 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 UBE2OQ9C0C9 1292 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 DNAI2Q9GZS0 605 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 MIS12Q9H081 205 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 SYNCQ9H7C4 482 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 ALG13Q9NP73 1137 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 METTL5Q9NRN9 209 aaKnown RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 UVRAGQ9P2Y5 699 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 ANAPC7Q9UJX3 599 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 PACSIN2Q9UNF0 486 aaPredicted RBP15.32■□□□□ 0.04
LRIF1-202ENST00000485275 TRANK1O15050 2925 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 GREB1Q4ZG55 1949 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
LRIF1-202ENST00000485275 H7C4K7 107 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 NCK2O43639 380 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
LRIF1-202ENST00000485275 OR1D2P34982 312 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 LIN9Q5TKA1 542 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 SDHAF4Q5VUM1 108 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 KIAA1841Q6NSI8 718 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 DNAJC24Q6P3W2 148 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 BHLHA9Q7RTU4 235 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 EMC1Q8N766 993 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 TRIM58Q8NG06 486 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 HSFY1Q96LI6 401 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 ABCB6Q9NP58 842 aa15.31■□□□□ 0.04
LRIF1-202ENST00000485275 DMAP1Q9NPF5 467 aaPredicted RBP15.31■□□□□ 0.04
LRIF1-202ENST00000485275 PARVAQ9NVD7 372 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms