RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 FGFR3P22607 806 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PIK3CAP42336 1068 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PDE6CP51160 858 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 BPIFB4P59827 614 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CLDN10P78369 228 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ROR1Q01973 937 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 GCNT1Q02742 428 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TMEM132DQ14C87 1099 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 LAPTM4AQ15012 233 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ZBTB6Q15916 424 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 KYAT1Q16773 422 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PROX2Q3B8N5 592 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CCDC181Q5TID7 509 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PAPD7Q5XG87 772 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CCDC70Q6NSX1 233 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 DCLRE1AQ6PJP8 1040 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TRAPPC11Q7Z392 1133 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SYCE1Q8N0S2 351 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TTC9BQ8N6N2 239 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 KREMEN2Q8NCW0 462 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 STKLD1Q8NE28 680 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SLC7A14Q8TBB6 771 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PLEKHO2Q8TD55 490 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CTNNBL1Q8WYA6 563 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PIK3R5Q8WYR1 880 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ZNF707Q96C28 371 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CCDC97Q96F63 343 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PGLYRP2Q96PD5 576 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 POP1Q99575 1024 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CGRRF1Q99675 332 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 AGPAT1Q99943 283 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PHF7Q9BWX1 381 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 MTMR12Q9C0I1 747 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SFXN1Q9H9B4 322 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PDE11AQ9HCR9 933 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 MTRRQ9UBK8 725 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 AJAP1Q9UKB5 411 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 POLIQ9UNA4 740 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TFR2Q9UP52 801 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 HYOU1Q9Y4L1 999 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 DUSP10Q9Y6W6 482 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TECTAO75443 2155 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 A0A0A6YYK5 440 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 LOC730098B7Z3J9 87 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 FOXN3O00409 490 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ENC1O14682 589 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 FANCGO15287 622 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 BUB1O43683 1085 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TADA3O75528 432 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 IL18RAPO95256 599 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SEC24AO95486 1093 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 VNN2O95498 520 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TNNC2P02585 160 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ATP1A1P05023 1023 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ITGB3P05106 788 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 C8AP07357 584 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TUBBP07437 444 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 COL9A1P20849 921 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TBXAS1P24557 533 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 LRPAP1P30533 357 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 POLR2BP30876 1174 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PAFAH1B1P43034 410 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TFAMQ00059 246 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ELF2Q15723 593 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ERCC6LQ2NKX8 1250 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ZACNQ401N2 412 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TEX35Q5T0J7 233 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 C9orf57Q5W0N0 161 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 LILRA6Q6PI73 481 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 GET4Q7L5D6 327 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 METTL3Q86U44 580 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 WDR49Q8IV35 697 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ARHGEF19Q8IW93 802 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 BRSK2Q8IWQ3 736 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 PDCL2Q8N4E4 241 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 GPR161Q8N6U8 529 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 OR5B17Q8NGF7 314 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TAS1R2Q8TE23 839 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 RSAD2Q8WXG1 361 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ING5Q8WYH8 240 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 ANKRD7Q92527 254 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SMG7Q92540 1137 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 TAF4BQ92750 862 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 UROC1Q96N76 676 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 CRISPLD1Q9H336 500 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 SLC38A7Q9NVC3 462 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 DZANK1Q9NVP4 752 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 RNF14Q9UBS8 474 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 FBXW11Q9UKB1 542 aa7.36□□□□□ -1.23
BRCA1-216ENST00000484087 UBQLN1Q9UMX0 589 aaKnown RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 V9GYY5 206 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-216ENST00000484087 OBSL1O75147 1896 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 ANKRD62A6NC57 917 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 DDX3XO00571 662 aaKnown RBP eCLIP7.35□□□□□ -1.23
BRCA1-216ENST00000484087 PDGFBP01127 241 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-216ENST00000484087 HLA-DRAP01903 254 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 C4BPAP04003 597 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms