RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PPIGQ13427 754 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■■□□ 17.6
HDAC6-226ENST00000483656 TAF5Q15542 800 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 TMEM240Q5SV17 173 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 DCAF12L1Q5VU92 463 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 DAB2IPQ5VWQ8 1189 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 OR6B2Q6IFH4 312 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 OLFML1Q6UWY5 402 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 RSPO2Q6UXX9 243 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 SCUBE3Q8IX30 993 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 CMTR2Q8IYT2 770 aaKnown RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 RNF168Q8IYW5 571 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 EMC1Q8N766 993 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 MSANTD4Q8NCY6 345 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 IPO4Q8TEX9 1081 aaKnown RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 CLEC4CQ8WTT0 213 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 KCTD13Q8WZ19 329 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 MS4A14Q96JA4 679 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 CAPZA3Q96KX2 299 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 HSFY1Q96LI6 401 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 KCNK16Q96T55 309 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 SELENOOQ9BVL4 669 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 SYNCQ9H7C4 482 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 CSNK1G1Q9HCP0 422 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 METTL5Q9NRN9 209 aaKnown RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 SMARCAL1Q9NZC9 954 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 IP6K2Q9UHH9 426 aa10.64□□□□□ -0.71
HDAC6-226ENST00000483656 MRPL42Q9Y6G3 142 aaKnown RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 MKI67P46013 3256 aaKnown RBP10.64□□□□□ -0.71
HDAC6-226ENST00000483656 SF3B1O75533 1304 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■■■■■ 66.8
HDAC6-226ENST00000483656 F8VP50 259 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 CES2O00748 559 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 KCNK3O14649 394 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
HDAC6-226ENST00000483656 TADA3O75528 432 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 FAM200BP0CF97 657 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 LCP1P13796 627 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 TCF4P15884 667 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 BDNFP23560 247 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
HDAC6-226ENST00000483656 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.713e-6■■■■□ 25.9
HDAC6-226ENST00000483656 SLC1A1P43005 524 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 ACADSBP45954 432 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 TERF1P54274 439 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 MAP3K7CLP57077 242 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 TAS2R40P59535 323 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 SLC6A3Q01959 620 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 RTP2Q5QGT7 225 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 FAM102AQ5T9C2 384 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-226ENST00000483656 DCUN1D2Q6PH85 259 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 KCNT2Q6UVM3 1135 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 ZNF572Q7Z3I7 529 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-226ENST00000483656 SLC39A11Q8N1S5 342 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 ARFGAP1Q8N6T3 406 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 NIPA2Q8N8Q9 360 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 FNIP1Q8TF40 1166 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 NDRG1Q92597 394 aaKnown RBP10.63□□□□□ -0.71
HDAC6-226ENST00000483656 IGSF21Q96ID5 467 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 PBKQ96KB5 322 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.63□□□□□ -0.715e-7■■■□□ 15.3
HDAC6-226ENST00000483656 UBXN6Q9BZV1 441 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 MIS12Q9H081 205 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 CXXC1Q9P0U4 656 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-226ENST00000483656 PCDHA3Q9Y5H8 950 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 NLRC5Q86WI3 1866 aa10.63□□□□□ -0.71
HDAC6-226ENST00000483656 C2CD4BA6NLJ0 364 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 MIF4GDA9UHW6 222 aaKnown RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 SPOPO43791 374 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 VNN2O95498 520 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 LINC00271P0C7V0 271 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 SYN1P17600 705 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 FLT3P36888 993 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 SCNN1AP37088 669 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 NDUFV1P49821 464 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 HTRA4P83105 476 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 TSPY1Q01534 308 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 ADIGQ0VDE8 80 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 ELAVL2Q12926 359 aaKnown RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 BTG3Q14201 252 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 NAA30Q147X3 362 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 MAPRE1Q15691 268 aaKnown RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 CTXN3Q4LDR2 81 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 SLC39A12Q504Y0 691 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 RAB6CQ53S08 254 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 RAB41Q5JT25 222 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 CC2D1AQ6P1N0 951 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 RSRC2Q7L4I2 434 aaKnown RBP10.62□□□□□ -0.71
HDAC6-226ENST00000483656 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 ZDHHC17Q8IUH5 632 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 RASGEF1CQ8N431 466 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 CEP112Q8N8E3 955 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 COLGALT1Q8NBJ5 622 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 RXFP2Q8WXD0 754 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 SMARCD1Q96GM5 515 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 RAB6CQ9H0N0 254 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 CHST7Q9NS84 486 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 PRKAG2Q9UGJ0 569 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms