RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.92■■□□□ 1.26
SYPL1-206ENST00000483448 PRMT8Q9NR22 394 aaPredicted RBP22.92■■□□□ 1.26
SYPL1-206ENST00000483448 RIF1Q5UIP0 2472 aaKnown RBP22.92■■□□□ 1.26
SYPL1-206ENST00000483448 MYO15AQ9UKN7 3530 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 COL4A2P08572 1712 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 IKBKBO14920 756 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 ARSAP15289 507 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 PIK3CAP42336 1068 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 PDE6CP51160 858 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 AMPD2Q01433 879 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 ADAM9Q13443 819 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 MTF1Q14872 753 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 PDGFRLQ15198 375 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 ZACNQ401N2 412 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 FAM186BQ8IYM0 893 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 GUF1Q8N442 669 aaKnown RBP22.91■■□□□ 1.26
SYPL1-206ENST00000483448 HPS4Q9NQG7 708 aa22.91■■□□□ 1.26
SYPL1-206ENST00000483448 DUS2Q9NX74 493 aaKnown RBP22.91■■□□□ 1.26
SYPL1-206ENST00000483448 ZNF638Q14966 1978 aaKnown RBP22.9■■□□□ 1.26
SYPL1-206ENST00000483448 IFNAR2P48551 515 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 MAMSTRQ6ZN01 415 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 SPEM1Q8N4L4 309 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 RIN3Q8TB24 985 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 SH3RF2Q8TEC5 729 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 TAF4BQ92750 862 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 FAM126AQ9BYI3 521 aaPredicted RBP22.9■■□□□ 1.26
SYPL1-206ENST00000483448 MMRN2Q9H8L6 949 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 GCNT4Q9P109 453 aa22.9■■□□□ 1.26
SYPL1-206ENST00000483448 PATJQ8NI35 1801 aa22.89■■□□□ 1.26
SYPL1-206ENST00000483448 MAPK13O15264 365 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 AKAP3O75969 853 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 HLA-DRAP01903 254 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 TRIM49P0CI25 452 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 TRIM49CP0CI26 452 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 PSMC2P35998 433 aaKnown RBP22.89■■□□□ 1.25
SYPL1-206ENST00000483448 PPP3CCP48454 512 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 CACNA2D1P54289 1103 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 NOP14P78316 857 aaKnown RBP22.89■■□□□ 1.25
SYPL1-206ENST00000483448 SATB1Q01826 763 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 GRSF1Q12849 480 aaKnown RBP eCLIP22.89■■□□□ 1.25
SYPL1-206ENST00000483448 TAF10Q12962 218 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 GAS6Q14393 721 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 Q6ZS52 159 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 INTS8Q75QN2 995 aaKnown RBP22.89■■□□□ 1.25
SYPL1-206ENST00000483448 ACOT1Q86TX2 421 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 SLITRK1Q96PX8 696 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 TTLL2Q9BWV7 592 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 SDCBP2Q9H190 292 aa22.89■■□□□ 1.25
SYPL1-206ENST00000483448 DENND4CQ5VZ89 1909 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 DMDP11532 3685 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 OTOL1A6NHN0 477 aaPredicted RBP22.88■■□□□ 1.25
SYPL1-206ENST00000483448 YWHAQP27348 245 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 GCLMP48507 274 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 PNOCQ13519 176 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 ZNF77Q15935 545 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 NFIL3Q16649 462 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 C1orf220Q5T0J3 134 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 SPOPLQ6IQ16 392 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 SMYD4Q8IYR2 804 aaPredicted RBP22.88■■□□□ 1.25
SYPL1-206ENST00000483448 NUP93Q8N1F7 819 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 CPA6Q8N4T0 437 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 ZBTB44Q8NCP5 570 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 OSCP1Q8WVF1 389 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 RUBCNQ92622 972 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 IMPG2Q9BZV3 1241 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 RMND1Q9NWS8 449 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 WNT6Q9Y6F9 365 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 VPS13AQ96RL7 3174 aa22.88■■□□□ 1.25
SYPL1-206ENST00000483448 FAM186AA6NE01 2351 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 ZNF840PA6NDX5 716 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 RTN3O95197 1032 aaPredicted RBP22.87■■□□□ 1.25
SYPL1-206ENST00000483448 TRIM21P19474 475 aaKnown RBP22.87■■□□□ 1.25
SYPL1-206ENST00000483448 NDST1P52848 882 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 ORC1Q13415 861 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 WDR44Q5JSH3 913 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 FAM35AQ86V20 835 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 FMR1NBQ8N0W7 255 aaPredicted RBP22.87■■□□□ 1.25
SYPL1-206ENST00000483448 SYNPOQ8N3V7 929 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 SUMF1Q8NBK3 374 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 NELL1Q92832 810 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 ATP2A3Q93084 1043 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 EXOC4Q96A65 974 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 KCNK16Q96T55 309 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 ECT2Q9H8V3 914 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 TMEM30AQ9NV96 361 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 NCDNQ9UBB6 729 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 ARHGAP26Q9UNA1 814 aa22.87■■□□□ 1.25
SYPL1-206ENST00000483448 AP1G2O75843 785 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 ASS1P00966 412 aaKnown RBP22.86■■□□□ 1.25
SYPL1-206ENST00000483448 PFKLP17858 780 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 USP4Q13107 963 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 NR1H3Q13133 447 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 CCINQ13939 588 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 CCDC150Q8NCX0 1101 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 FBXO32Q969P5 355 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 EEF2KMTQ96G04 330 aa22.86■■□□□ 1.25
SYPL1-206ENST00000483448 OBSL1O75147 1896 aa22.85■■□□□ 1.25
SYPL1-206ENST00000483448 LEFTY2O00292 366 aa22.85■■□□□ 1.25
SYPL1-206ENST00000483448 TRDMT1O14717 391 aaKnown RBP22.85■■□□□ 1.25
SYPL1-206ENST00000483448 SMC2O95347 1197 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms