RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RHPN2Q8IUC4 686 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 OGFOD1Q8N543 542 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 POU5F2Q8N7G0 328 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 CCDC124Q96CT7 223 aaKnown RBP12.33□□□□□ -0.43
VTI1A-205ENST00000483122 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 EBF4Q9BQW3 602 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 STRA6Q9BX79 667 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 GINM1Q9NU53 330 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 WRAP73Q9P2S5 460 aaPredicted RBP12.33□□□□□ -0.43
VTI1A-205ENST00000483122 SEL1LQ9UBV2 794 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 FETUBQ9UGM5 382 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 SOX13Q9UN79 622 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 SHOC2Q9UQ13 582 aa12.33□□□□□ -0.43
VTI1A-205ENST00000483122 HEMK1Q9Y5R4 338 aaPredicted RBP12.33□□□□□ -0.43
VTI1A-205ENST00000483122 K7ENM7 598 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 NDC80O14777 642 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 ADRB2P07550 413 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 SERPINB6P35237 376 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 FDFT1P37268 417 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 NCKAP1LP55160 1127 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-205ENST00000483122 PLCB3Q01970 1234 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 SLC18A2Q05940 514 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 GK3PQ14409 553 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 KLHL38Q2WGJ6 581 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 EXD1Q8NHP7 514 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 RILPQ96NA2 401 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 SIKE1Q9BRV8 207 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 TMEM121Q9BTD3 319 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 C1orf21Q9H246 121 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 C10orf88Q9H8K7 445 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-205ENST00000483122 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
VTI1A-205ENST00000483122 DMTF1Q9Y222 760 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
VTI1A-205ENST00000483122 TNRC6CQ9HCJ0 1690 aaKnown RBP12.33□□□□□ -0.44
VTI1A-205ENST00000483122 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
VTI1A-205ENST00000483122 STRNO43815 780 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 MMP10P09238 476 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 KRT5P13647 590 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 CD97P48960 835 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 PTK7Q13308 1070 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 AP3B2Q13367 1082 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 ZFYVE27Q5T4F4 411 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 CC2D2BQ6DHV5 1058 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 MFSD7Q6UXD7 560 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 DAW1Q8N136 415 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 MARVELD2Q8N4S9 558 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 BTBD9Q96Q07 612 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 WWP1Q9H0M0 922 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 PCDH18Q9HCL0 1135 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 APPL1Q9UKG1 709 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 H3BSA7 217 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 I3L4J1 428 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 CCNT2O60583 730 aaKnown RBP12.32□□□□□ -0.44
VTI1A-205ENST00000483122 DNAJA2O60884 412 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 SERPINB2P05120 415 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 SSTR3P32745 418 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-205ENST00000483122 RPL26P61254 145 aaKnown RBP12.32□□□□□ -0.44
VTI1A-205ENST00000483122 COG7P83436 770 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 TMPRSS15P98073 1019 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 PICALMQ13492 652 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 SLC44A4Q53GD3 710 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
VTI1A-205ENST00000483122 PALM2Q8IXS6 379 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 FNDC8Q8TC99 324 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 GLT8D2Q9H1C3 349 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 HSPBP1Q9NZL4 362 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-205ENST00000483122 DTNAQ9Y4J8 743 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
VTI1A-205ENST00000483122 TCRBV7S3A2A0A539 114 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 H3BNX3 289 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SGK1O00141 431 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 KLF11O14901 512 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SLURP2P0DP57 97 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 MYBPC1Q00872 1141 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 BTG3Q14201 252 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 OASLQ15646 514 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 BBS9Q3SYG4 887 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 RABGAP1LQ5R372 815 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 IYDQ6PHW0 289 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 NCCRP1Q6ZVX7 275 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 NUP93Q8N1F7 819 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 C7orf26Q96N11 449 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SRPK1Q96SB4 655 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 MRPS26Q9BYN8 205 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SHCBP1LQ9BZQ2 653 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms