RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SESN2P58004 480 aaPredicted RBP13.27□□□□□ -0.29
VPS52-218ENST00000482399 OGDHQ02218 1023 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 RNASEH2BQ5TBB1 312 aaKnown RBP13.27□□□□□ -0.29
VPS52-218ENST00000482399 TRIM72Q6ZMU5 477 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 RIPOR1Q6ZS17 1223 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 C4orf19Q8IY42 314 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 RBM15BQ8NDT2 890 aaKnown RBP13.27□□□□□ -0.29
VPS52-218ENST00000482399 GSTCDQ8NEC7 633 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 FBXO27Q8NI29 283 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 ATG4CQ96DT6 458 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 ZNF184Q99676 751 aaPredicted RBP13.27□□□□□ -0.29
VPS52-218ENST00000482399 ADPGKQ9BRR6 497 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 TUBB6Q9BUF5 446 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 ACSS2Q9NR19 701 aa13.27□□□□□ -0.29
VPS52-218ENST00000482399 ZNF277Q9NRM2 450 aaPredicted RBP13.27□□□□□ -0.29
VPS52-218ENST00000482399 hCG_1818297A0A087WSY0 165 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 TCRBV9S1A1TA0A576 114 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 PRPF4O43172 522 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■■■■ 32.4
VPS52-218ENST00000482399 ZNF862O60290 1169 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 DGAT1O75907 488 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 ICAM1P05362 532 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 CRADDP78560 199 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 CCDC15Q0P6D6 951 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 KLF1Q13351 362 aaPredicted RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 EMC2Q15006 297 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 NXNQ6DKJ4 435 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 PCGF5Q86SE9 256 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 LRRC71Q8N4P6 559 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 PDCD2LQ9BRP1 358 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 VPS11Q9H270 941 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 JPH1Q9HDC5 661 aaPredicted RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 UTRNP46939 3433 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 NAV1Q8NEY1 1877 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 CLUHO75153 1309 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 M0QYV0 167 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 GNAZP19086 355 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 KCNA4P22459 653 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 GCAP28676 217 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 MSX2P35548 267 aaPredicted RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 CAP2P40123 477 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 PGM5Q15124 567 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 ZACNQ401N2 412 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 CCDC60Q8IWA6 550 aaPredicted RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 RNF148Q8N7C7 305 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 ZNF333Q96JL9 665 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 MMP19Q99542 508 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 FOXP3Q9BZS1 431 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 SMYD2Q9NRG4 433 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 FIS1Q9Y3D6 152 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 LRRC42Q9Y546 428 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 A0A1B0GVG6 124 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 MAGEA13PA6NCF6 341 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 PRR5-ARHGAP8B1AHC4 643 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 KIF3CO14782 793 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 DHX15O43143 795 aaKnown RBP13.26□□□□□ -0.29
VPS52-218ENST00000482399 PRPSAP2O60256 369 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 UGT1A9O60656 530 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 ARHGAP8P85298 464 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 HIC1Q14526 733 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 ZNF677Q86XU0 584 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 TMEM130Q8N3G9 435 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 SH3TC2Q8TF17 1288 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 SLCO2A1Q92959 643 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 MIS12Q9H081 205 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 WWP1Q9H0M0 922 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 UGT1A7Q9HAW7 530 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 UGT1A10Q9HAW8 530 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 UGT1A8Q9HAW9 530 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 CYP26B1Q9NR63 512 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 NR2E3Q9Y5X4 410 aa13.26□□□□□ -0.29
VPS52-218ENST00000482399 DDX60LQ5H9U9 1706 aaKnown RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 NEMP1O14524 444 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 LYPLA1O75608 230 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 DGKIO75912 1065 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 PGM3O95394 542 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 KRT7P08729 469 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 ABHD2P08910 425 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 TBXAS1P24557 533 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 SFNP31947 248 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 STX3Q13277 289 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 CUL3Q13618 768 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 LAMB3Q13751 1172 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 PIGHQ14442 188 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 LRRC23Q53EV4 343 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 LPCAT4Q643R3 524 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 CDCA2Q69YH5 1023 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 WDR75Q8IWA0 830 aaKnown RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 DENND1AQ8TEH3 1009 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 TTLL3Q9Y4R7 772 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 NUMBLQ9Y6R0 609 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms