RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 TRIM71Q2Q1W2 868 aaKnown RBP3.2□□□□□ -1.9
KDM1A-204ENST00000481879 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
KDM1A-204ENST00000481879 RGS7BPQ6MZT1 257 aaPredicted RBP3.2□□□□□ -1.9
KDM1A-204ENST00000481879 ADAMTS18Q8TE60 1221 aa3.2□□□□□ -1.9
KDM1A-204ENST00000481879 BRINP2Q9C0B6 783 aa3.2□□□□□ -1.9
KDM1A-204ENST00000481879 CIPCQ9C0C6 399 aa3.2□□□□□ -1.9
KDM1A-204ENST00000481879 FEZ2Q9UHY8 353 aaPredicted RBP3.2□□□□□ -1.9
KDM1A-204ENST00000481879 NDRG4Q9ULP0 352 aaKnown RBP3.2□□□□□ -1.9
KDM1A-204ENST00000481879 TNKSO95271 1327 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 TCRBV5S1A1TA0A578 114 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 SHTN1A0MZ66 631 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 ADAM10O14672 748 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 ABLIM3O94929 683 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 A1BGP04217 495 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 ALPLP05186 524 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 PRKCBP05771 671 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 IBSPP21815 317 aaPredicted RBP3.19□□□□□ -1.9
KDM1A-204ENST00000481879 THBS3P49746 956 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 FAM187BQ17R55 369 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 PNMA8AQ86V59 439 aaPredicted RBP3.19□□□□□ -1.9
KDM1A-204ENST00000481879 PPP1R3BQ86XI6 285 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 ACRBPQ8NEB7 543 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 STAG1Q8WVM7 1258 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 LYZL4Q96KX0 146 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 MOGAT1Q96PD6 335 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 EFHD1Q9BUP0 239 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 DPCDQ9BVM2 203 aaPredicted RBP3.19□□□□□ -1.9
KDM1A-204ENST00000481879 FOXP1Q9H334 677 aaPredicted RBP3.19□□□□□ -1.9
KDM1A-204ENST00000481879 PI4KBQ9UBF8 816 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 GABRQQ9UN88 632 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 PCDHA1Q9Y5I3 950 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 WASHC2CQ9Y4E1 1318 aa3.19□□□□□ -1.9
KDM1A-204ENST00000481879 TMEM232C9JQI7 657 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 TYRP14679 529 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 HOXD9P28356 352 aaPredicted RBP3.18□□□□□ -1.9
KDM1A-204ENST00000481879 ODF1Q14990 250 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 LEXMQ3ZCV2 418 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 DLK2Q6UY11 383 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 MIER2Q8N344 545 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 PCSK9Q8NBP7 692 aaKnown RBP3.18□□□□□ -1.9
KDM1A-204ENST00000481879 ZNF398Q8TD17 642 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 SOCS4Q8WXH5 440 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 FAM167AQ96KS9 214 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 CCDC17Q96LX7 622 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 FYTTD1Q96QD9 318 aaKnown RBP3.18□□□□□ -1.9
KDM1A-204ENST00000481879 LMBRD1Q9NUN5 540 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 POT1Q9NUX5 634 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 PNPOQ9NVS9 261 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 ZNF112Q9UJU3 913 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 NOTCH4Q99466 2003 aa3.18□□□□□ -1.9
KDM1A-204ENST00000481879 BTBD19C9JJ37 291 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 hCG_1984214I3L0E3 225 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 AP4M1O00189 453 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 GCATO75600 419 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 ZRANB2O95218 330 aaKnown RBP eCLIP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 FTLP02792 175 aaPredicted RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 MYCLP12524 364 aaPredicted RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 HDCP19113 662 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 NCLP19338 710 aaKnown RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 PDCP20941 246 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 FPR3P25089 353 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 PDE6CP51160 858 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 IGBP1P78318 339 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 SATB1Q01826 763 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 EXOSC9Q06265 439 aaKnown RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 ERV3-1Q14264 604 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 SEMA3AQ14563 771 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 RNASE12Q5GAN4 147 aaKnown RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 EMC10Q5UCC4 262 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 C9orf47Q6ZRZ4 202 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 ZBTB46Q86UZ6 589 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 OSCP1Q8WVF1 389 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 SIGLEC11Q96RL6 698 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 VPS33BQ9H267 617 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 DDX56Q9NY93 547 aaKnown RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 SHOC2Q9UQ13 582 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 MRPS17Q9Y2R5 130 aaKnown RBP3.17□□□□□ -1.9
KDM1A-204ENST00000481879 PLEKHM1Q9Y4G2 1056 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 FER1L4A9Z1Z3 1794 aa3.17□□□□□ -1.9
KDM1A-204ENST00000481879 ZMYM2Q9UBW7 1377 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 FAM90A8PA6NJQ4 464 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 H3BNX3 289 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 UNC5CO95185 931 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 CRYABP02511 175 aaKnown RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 GRPP07492 148 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 FAM90A13PP0C7W8 464 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 FAM90A24PP0C7X0 464 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 LRPAP1P30533 357 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 VIPR2P41587 438 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 NEK2P51955 445 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 NANOS2P60321 138 aaKnown RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 E2F1Q01094 437 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 ZNF91Q05481 1191 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 NPY5RQ15761 445 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 CYP1B1Q16678 543 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 DEPDC1Q5TB30 811 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 BCDIN3DQ7Z5W3 292 aaKnown RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 CAND1Q86VP6 1230 aaKnown RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 SLC15A3Q8IY34 581 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 PRR18Q8N4B5 295 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms