RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 LBHD1Q9BQE6 289 aaPredicted RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 GON7Q9BXV9 100 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 EDEM3Q9BZQ6 932 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 MKRN2Q9H000 416 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 AVENQ9NQS1 362 aaPredicted RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 PCDHA4Q9UN74 947 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 PCDH11YQ9BZA8 1340 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 MAGEB16A2A368 324 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 ZNF839A8K0R7 811 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 KLHL41O60662 606 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 SRGAP2BP0DMP2 458 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 PEX2P28328 305 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 RRM2P31350 389 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 CIITAP33076 1130 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 SLCO1A2P46721 670 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 PTENP60484 403 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 MTHFSDQ2M296 383 aaKnown RBP10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 KRT40Q6A162 431 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 IQSEC1Q6DN90 963 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 RNF19BQ6ZMZ0 732 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 ZNF704Q6ZNC4 412 aaPredicted RBP10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 FBXL6Q8N531 539 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 CATSPER1Q8NEC5 780 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 RFWD2Q8NHY2 731 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 GRPEL2Q8TAA5 225 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 CHAC2Q8WUX2 184 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 MTBPQ96DY7 904 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 ZNF717Q9BY31 904 aaPredicted RBP10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 DPEP3Q9H4B8 488 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 SNTG2Q9NY99 539 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
PRPF4B-206ENST00000481109 CACNA1FO60840 1977 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 PSMD12O00232 456 aaPredicted RBP10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 TAF4O00268 1085 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 NCAM2O15394 837 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 CAMTA2O94983 1202 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 BMP10O95393 424 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 SNRPAP09012 282 aaKnown RBP10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 GSTM2P28161 218 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC1A4P43007 532 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 PHKA1P46020 1223 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 RNASE9P60153 205 aaKnown RBP10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 OCA2Q04671 838 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 CLUL1Q15846 466 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 CAVIN4Q5BKX8 364 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 C1orf146Q5VVC0 180 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 METTL11BQ5VVY1 283 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 ULK2Q8IYT8 1036 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 ANKRD35Q8N283 1001 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 TSPAN14Q8NG11 270 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 HES6Q96HZ4 224 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 RPRD1AQ96P16 312 aaPredicted RBP10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 NACC1Q96RE7 527 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 SNX18Q96RF0 628 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 CDRT15Q96T59 188 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 AP1M1Q9BXS5 423 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 MRPL11Q9Y3B7 192 aaKnown RBP10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 DTNAQ9Y4J8 743 aa10.77□□□□□ -0.68
PRPF4B-206ENST00000481109 FAM47DPA6NHR8 397 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 MUSKO15146 869 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 MTSS1O43312 755 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 HLA-DRAP01903 254 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 C4AP0C0L4 1744 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 C4BP0C0L5 1744 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 CREB1P16220 341 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 PLTPP55058 493 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 HLFQ16534 295 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 PPM1LQ5SGD2 360 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 LPCAT4Q643R3 524 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 AKAP14Q86UN6 197 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 SRBD1Q8N5C6 995 aaKnown RBP10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 ANKRD13CQ8N6S4 541 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 DTX3Q8N9I9 347 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 SLC4A11Q8NBS3 891 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 SHCBP1Q8NEM2 672 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 C12orf43Q96C57 262 aaKnown RBP10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 NRBF2Q96F24 287 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 CDK5RAP1Q96SZ6 601 aaKnown RBP10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 TSG101Q99816 390 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 ACAT2Q9BWD1 397 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 PCDH12Q9NPG4 1184 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 STRN4Q9NRL3 753 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 EMC3Q9P0I2 261 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 VPS54Q9P1Q0 977 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 SLC7A8Q9UHI5 535 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 ANAPC5Q9UJX4 755 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 ADAMTS6Q9UKP5 1117 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 PFASO15067 1338 aa10.77□□□□□ -0.69
PRPF4B-206ENST00000481109 DIP2BQ9P265 1576 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms