RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 LRP3O75074 770 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 ZSCAN22P10073 491 aaPredicted RBP20.1■□□□□ 0.81
ABCF3-214ENST00000480562 ME1P48163 572 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 TNNC1P63316 161 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 WDR72Q3MJ13 1102 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 PRR23CQ6ZRP0 262 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 GRAMD1CQ8IYS0 662 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 EZH1Q92800 747 aaPredicted RBP20.1■□□□□ 0.81
ABCF3-214ENST00000480562 CD101Q93033 1021 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 ATP2A3Q93084 1043 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 RTKNQ9BST9 563 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 DPEP3Q9H4B8 488 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 MAGEF1Q9HAY2 307 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 FAM13BQ9NYF5 915 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 TRPM5Q9NZQ8 1165 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 ARHGAP26Q9UNA1 814 aa20.1■□□□□ 0.81
ABCF3-214ENST00000480562 F8VP50 259 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 TACC1O75410 805 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 RPP40O75818 363 aaKnown RBP20.09■□□□□ 0.81
ABCF3-214ENST00000480562 F13A1P00488 732 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 PTPN1P18031 435 aaKnown RBP20.09■□□□□ 0.81
ABCF3-214ENST00000480562 CASP4P49662 377 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 CACNA2D1P54289 1103 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 MYL6P60660 151 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 SNRPFP62306 86 aaKnown RBP20.09■□□□□ 0.81
ABCF3-214ENST00000480562 ZXDBP98169 803 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 TRPC3Q13507 836 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 CSRP2Q16527 193 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 RESP18Q5W5W9 173 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 RPLP0P6Q8NHW5 317 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 GAB3Q8WWW8 586 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 HHIPQ96QV1 700 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 TTLL2Q9BWV7 592 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 NXF1Q9UBU9 619 aaKnown RBP20.09■□□□□ 0.81
ABCF3-214ENST00000480562 RALGAPA1Q6GYQ0 2036 aa20.09■□□□□ 0.81
ABCF3-214ENST00000480562 PTPRDP23468 1912 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 TRIM66O15016 1216 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 AXIN1O15169 862 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 PSMD2Q13200 908 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 CCDC6Q16204 474 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 BMT2Q1RMZ1 405 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 KBTBD6Q86V97 674 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 NETO1Q8TDF5 533 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 EXOC4Q96A65 974 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 C8orf48Q96LL4 319 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 CEP295NLQ96MC4 621 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 ZNF518BQ9C0D4 1074 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 XYLT2Q9H1B5 865 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 TMEM30AQ9NV96 361 aa20.08■□□□□ 0.81
ABCF3-214ENST00000480562 CCDC163A0A0D9SF12 145 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 PVALEFA0A1B0GWK0 134 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 ZNF840PA6NDX5 716 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 LEFTY2O00292 366 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 CLDN5O00501 218 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 GDF9O60383 454 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 EXOC3O60645 756 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 PHACTR2O75167 634 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 ABL1P00519 1130 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 HSP90AA1P07900 732 aaKnown RBP20.07■□□□□ 0.8
ABCF3-214ENST00000480562 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 TCF3P15923 654 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 PDE6CP51160 858 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 PKP1Q13835 747 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 KNOP1Q1ED39 458 aaKnown RBP20.07■□□□□ 0.8
ABCF3-214ENST00000480562 FBXO43Q4G163 708 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 HSCBQ8IWL3 235 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 C12orf56Q8IXR9 622 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 PLEKHO2Q8TD55 490 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 ELMO3Q96BJ8 720 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 B3GNT5Q9BYG0 378 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 RNF38Q9H0F5 515 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 ARRDC1-AS1Q9H2J1 176 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 SMPD4Q9NXE4 827 aa20.07■□□□□ 0.8
ABCF3-214ENST00000480562 A8MXQ7 604 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 SCAMP3O14828 347 aaKnown RBP20.06■□□□□ 0.8
ABCF3-214ENST00000480562 SLC30A4O14863 429 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 FAM163BP0C2L3 166 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 CDH8P55286 799 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 NOP14P78316 857 aaKnown RBP20.06■□□□□ 0.8
ABCF3-214ENST00000480562 IFRD2Q12894 506 aaPredicted RBP20.06■□□□□ 0.8
ABCF3-214ENST00000480562 TAF10Q12962 218 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 NR1H3Q13133 447 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 CACNA2D4Q7Z3S7 1137 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 CAMKK1Q8N5S9 505 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 SMYD3Q9H7B4 428 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 EHD2Q9NZN4 543 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 CGNQ9P2M7 1197 aaKnown RBP20.06■□□□□ 0.8
ABCF3-214ENST00000480562 SERTAD1Q9UHV2 236 aa20.06■□□□□ 0.8
ABCF3-214ENST00000480562 HELZP42694 1942 aaKnown RBP20.06■□□□□ 0.8
ABCF3-214ENST00000480562 CLSTN1O94985 981 aa20.05■□□□□ 0.8
ABCF3-214ENST00000480562 NFATC1O95644 943 aa20.05■□□□□ 0.8
ABCF3-214ENST00000480562 STAU1O95793 577 aaKnown RBP20.05■□□□□ 0.8
ABCF3-214ENST00000480562 PFKLP17858 780 aa20.05■□□□□ 0.8
ABCF3-214ENST00000480562 RAP1GAPP47736 663 aa20.05■□□□□ 0.8
ABCF3-214ENST00000480562 SLC7A9P82251 487 aa20.05■□□□□ 0.8
ABCF3-214ENST00000480562 DNM1Q05193 864 aaKnown RBP20.05■□□□□ 0.8
ABCF3-214ENST00000480562 BIRC3Q13489 604 aa20.05■□□□□ 0.8
ABCF3-214ENST00000480562 SF3A2Q15428 464 aaKnown RBP20.05■□□□□ 0.8
ABCF3-214ENST00000480562 TDRD10Q5VZ19 366 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms