RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 WDR87Q6ZQQ6 2873 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 F8VZ95 297 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 O00370 1275 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 PRRG1O14668 218 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 CCL16O15467 120 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 VDRP11473 427 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 BRD2P25440 801 aaKnown RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 ADORA2BP29275 332 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 ELF1P32519 619 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 USP8P40818 1118 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 MAGEA11P43364 429 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 YWHAEP62258 255 aaKnown RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 NTHL1P78549 312 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 TWF1Q12792 350 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 MTMR3Q13615 1198 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 MAPRE1Q15691 268 aaKnown RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 RARS2Q5T160 578 aaKnown RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 E4F1Q66K89 784 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 ARHGAP17Q68EM7 881 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 SLC47A2Q86VL8 602 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 GIPC2Q8TF65 315 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 ZNF606Q8WXB4 792 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 FUBP3Q96I24 572 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 SEPT5Q99719 369 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 PRKD2Q9BZL6 878 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 CSNK1G1Q9HCP0 422 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 DNMT3BQ9UBC3 853 aaKnown RBP12.97□□□□□ -0.33
TRA2B-212ENST00000480461 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 YIPF1Q9Y548 306 aa12.97□□□□□ -0.33
TRA2B-212ENST00000480461 HHLA1C9JL84 531 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 F8VP50 259 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 TULP2O00295 520 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 GFPT2O94808 682 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 CD19P15391 556 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
TRA2B-212ENST00000480461 HOXB8P17481 243 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-212ENST00000480461 TUFMP49411 452 aaKnown RBP12.96□□□□□ -0.33
TRA2B-212ENST00000480461 ZNF75DP51815 510 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 CNGA2Q16280 664 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 CCDC149Q6ZUS6 474 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 RTL10Q7L3V2 364 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 DNAJB7Q7Z6W7 309 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-212ENST00000480461 GPR149Q86SP6 731 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 VSTM4Q8IW00 320 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 SCN4BQ8IWT1 228 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 UBALD2Q8IYN6 164 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 CMASQ8NFW8 434 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-212ENST00000480461 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 CPLX3Q8WVH0 158 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 DDX1Q92499 740 aaKnown RBP12.96□□□□□ -0.33
TRA2B-212ENST00000480461 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 TRIM5Q9C035 493 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 ADAM7Q9H2U9 754 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 SMOC2Q9H3U7 446 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 ZDHHC7Q9NXF8 308 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 KIAA1257Q9ULG3 409 aa12.96□□□□□ -0.33
TRA2B-212ENST00000480461 TNFRSF10BO14763 440 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 AP1G2O75843 785 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 GYPCP04921 128 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRA2B-212ENST00000480461 CHRNB2P17787 502 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 RFX1P22670 979 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 HOXA9P31269 272 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 SOX5P35711 763 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 GRIK1P39086 918 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 USP46P62068 366 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 FIGNQ5HY92 759 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 DENND1BQ6P3S1 775 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 GRASPQ7Z6J2 395 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-212ENST00000480461 NOP9Q86U38 636 aaKnown RBP12.95□□□□□ -0.34
TRA2B-212ENST00000480461 ANKRD52Q8NB46 1076 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 OLIG1Q8TAK6 271 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 DUSP16Q9BY84 665 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 SFXN1Q9H9B4 322 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 ZNF334Q9HCZ1 680 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-212ENST00000480461 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 DZANK1Q9NVP4 752 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 TSPAN16Q9UKR8 245 aa12.95□□□□□ -0.34
TRA2B-212ENST00000480461 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRA2B-212ENST00000480461 MED19A0JLT2 244 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms