RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CHURC1Q8WUH1 139 aa21.65■■□□□ 1.06
COL13A1-208ENST00000479733 ZNF606Q8WXB4 792 aa21.65■■□□□ 1.06
COL13A1-208ENST00000479733 CFAP36Q96G28 342 aa21.65■■□□□ 1.06
COL13A1-208ENST00000479733 C1QBPQ07021 282 aaKnown RBP21.64■■□□□ 1.06
COL13A1-208ENST00000479733 PCGF5Q86SE9 256 aa21.64■■□□□ 1.06
COL13A1-208ENST00000479733 RASSF3Q86WH2 238 aa21.64■■□□□ 1.06
COL13A1-208ENST00000479733 NUB1Q9Y5A7 615 aa21.64■■□□□ 1.06
COL13A1-208ENST00000479733 RBBP6Q7Z6E9 1792 aaKnown RBP21.64■■□□□ 1.05
COL13A1-208ENST00000479733 TCP10L2B9ZVM9 353 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 TRIM49D1C9J1S8 452 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 MAGEC1O60732 1142 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 CD48P09326 243 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 SPATA31D3P0C874 917 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 ZACNQ401N2 412 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 CES4AQ5XG92 561 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 LPCAT4Q643R3 524 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 SPATA31D4Q6ZUB0 917 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 USP6NLQ92738 828 aa21.64■■□□□ 1.05
COL13A1-208ENST00000479733 DDX43Q9NXZ2 648 aaKnown RBP21.64■■□□□ 1.05
COL13A1-208ENST00000479733 A6NJR5 290 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 ZC3H11AO75152 810 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL13A1-208ENST00000479733 TM7SF2O76062 418 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 CCNE2O96020 404 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 HARSP12081 509 aaKnown RBP21.63■■□□□ 1.05
COL13A1-208ENST00000479733 ACTR3P61158 418 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 CHI3L2Q15782 390 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 NET1Q7Z628 596 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-208ENST00000479733 CHSY1Q86X52 802 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 GLIS2Q9BZE0 524 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-208ENST00000479733 SHCBP1LQ9BZQ2 653 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 CAPN14A8MX76 684 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 MMP8P22894 467 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 SLC25A3Q00325 362 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 BMPR2Q13873 1038 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 ZBTB41Q5SVQ8 909 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 TRIM72Q6ZMU5 477 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 ZCCHC23Q6ZST2 131 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 MYLK4Q86YV6 388 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-208ENST00000479733 VCPIP1Q96JH7 1222 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 ZBTB45Q96K62 511 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-208ENST00000479733 PCSK1NQ9UHG2 260 aa21.63■■□□□ 1.05
COL13A1-208ENST00000479733 CCNFP41002 786 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 LIG4P49917 911 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 USP4Q13107 963 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 TRMT5Q32P41 509 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 C15orf39Q6ZRI6 1047 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 CCDC124Q96CT7 223 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 TAGLN3Q9UI15 199 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 MYH9P35579 1960 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 F8W8V4 182 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 STK10O94804 968 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 SORBS2O94875 1100 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 C4BPAP04003 597 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 CDK7P50613 346 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 EPHB1P54762 984 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 C4orf19Q8IY42 314 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 POU5F2Q8N7G0 328 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 EBF4Q9BQW3 602 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 CENPKQ9BS16 269 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 PLA2G4CQ9UP65 541 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 TMX2Q9Y320 296 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 NFASCO94856 1347 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 TESPA1A2RU30 521 aaPredicted RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 TXNDC9O14530 226 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 ZC3H12AQ5D1E8 599 aaKnown RBP21.62■■□□□ 1.05
COL13A1-208ENST00000479733 SIPA1L1O43166 1804 aa21.62■■□□□ 1.05
COL13A1-208ENST00000479733 WEE2P0C1S8 567 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 EFCAB3Q8N7B9 438 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 SLC26A7Q8TE54 656 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 AZIN2Q96A70 460 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 E2F7Q96AV8 911 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 C20orf27Q9GZN8 174 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 VCX3BQ9H321 246 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 VCX3AQ9NNX9 186 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 CNTN3Q9P232 1028 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 FETUBQ9UGM5 382 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 ZNF541Q9H0D2 1346 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 FAM81AQ8TBF8 368 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 SLC44A1Q8WWI5 657 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 PRMT6Q96LA8 375 aaPredicted RBP21.61■■□□□ 1.05
COL13A1-208ENST00000479733 KCNK4Q9NYG8 393 aa21.61■■□□□ 1.05
COL13A1-208ENST00000479733 C6orf222P0C671 652 aaPredicted RBP21.6■■□□□ 1.05
COL13A1-208ENST00000479733 IL1R2P27930 398 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 CRABP2P29373 138 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 ST13P4Q8IZP2 240 aaPredicted RBP21.6■■□□□ 1.05
COL13A1-208ENST00000479733 OR5B17Q8NGF7 314 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 PPP2R3CQ969Q6 453 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 NMD3Q96D46 503 aaKnown RBP21.6■■□□□ 1.05
COL13A1-208ENST00000479733 CLRN2A0PK11 232 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 PDE5AO76074 875 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 OR6B1O95007 311 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 TOP3BO95985 862 aaKnown RBP21.6■■□□□ 1.05
COL13A1-208ENST00000479733 PSMA2P25787 234 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 PDE1BQ01064 536 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 SFT2D3Q587I9 215 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 SH2D5Q6ZV89 423 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 TAS1R3Q7RTX0 852 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 RFX6Q8HWS3 928 aa21.6■■□□□ 1.05
COL13A1-208ENST00000479733 NUDCD3Q8IVD9 361 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms