RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 ATG13O75143 517 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 TADA3O75528 432 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 GTF2H1P32780 548 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 MCCD1P59942 119 aaPredicted RBP16.02■□□□□ 0.16
PRKN-207ENST00000479615 GRSF1Q12849 480 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRKN-207ENST00000479615 ADAM9Q13443 819 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 MTF1Q14872 753 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 CPA6Q8N4T0 437 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 OSCP1Q8WVF1 389 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 RUBCNQ92622 972 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 ATP2A3Q93084 1043 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 GSDMAQ96QA5 445 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 SMG9Q9H0W8 520 aaKnown RBP16.02■□□□□ 0.16
PRKN-207ENST00000479615 FAM124BQ9H5Z6 455 aaPredicted RBP16.02■□□□□ 0.16
PRKN-207ENST00000479615 GCNT4Q9P109 453 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 CCL26Q9Y258 94 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 RIF1Q5UIP0 2472 aaKnown RBP16.02■□□□□ 0.15
PRKN-207ENST00000479615 NUP210Q8TEM1 1887 aaPredicted RBP16.01■□□□□ 0.15
PRKN-207ENST00000479615 TRDMT1O14717 391 aaKnown RBP16.01■□□□□ 0.15
PRKN-207ENST00000479615 LILRB5O75023 590 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 SMC2O95347 1197 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 VNN1O95497 513 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 ASS1P00966 412 aaKnown RBP16.01■□□□□ 0.15
PRKN-207ENST00000479615 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 HOXA6P31267 233 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 CNR2P34972 360 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 CCINQ13939 588 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 ZNF77Q15935 545 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 COBLL1Q53SF7 1204 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 DDX42Q86XP3 938 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRKN-207ENST00000479615 FAM186BQ8IYM0 893 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 CRYBG2Q8N1P7 616 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 TTC39CQ8N584 583 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 GPR161Q8N6U8 529 aaKnown RBP16.01■□□□□ 0.15
PRKN-207ENST00000479615 STKLD1Q8NE28 680 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 SMARCD1Q96GM5 515 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 GOLPH3LQ9H4A5 285 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 CYP3A43Q9HB55 503 aa16.01■□□□□ 0.15
PRKN-207ENST00000479615 DMAP1Q9NPF5 467 aaPredicted RBP16.01■□□□□ 0.15
PRKN-207ENST00000479615 DUS2Q9NX74 493 aaKnown RBP16.01■□□□□ 0.15
PRKN-207ENST00000479615 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
PRKN-207ENST00000479615 ZNF840PA6NDX5 716 aa16■□□□□ 0.15
PRKN-207ENST00000479615 SLC9A3R1O14745 358 aaPredicted RBP16■□□□□ 0.15
PRKN-207ENST00000479615 CETN3O15182 167 aa16■□□□□ 0.15
PRKN-207ENST00000479615 AKAP3O75969 853 aa16■□□□□ 0.15
PRKN-207ENST00000479615 DRD1P21728 446 aa16■□□□□ 0.15
PRKN-207ENST00000479615 YWHAQP27348 245 aa16■□□□□ 0.15
PRKN-207ENST00000479615 PIK3CAP42336 1068 aa16■□□□□ 0.15
PRKN-207ENST00000479615 SOX9P48436 509 aa16■□□□□ 0.15
PRKN-207ENST00000479615 IFNAR2P48551 515 aa16■□□□□ 0.15
PRKN-207ENST00000479615 DLG4P78352 724 aa16■□□□□ 0.15
PRKN-207ENST00000479615 SLC7A9P82251 487 aa16■□□□□ 0.15
PRKN-207ENST00000479615 TNK2Q07912 1038 aa16■□□□□ 0.15
PRKN-207ENST00000479615 USP4Q13107 963 aa16■□□□□ 0.15
PRKN-207ENST00000479615 CCDC142Q17RM4 750 aa16■□□□□ 0.15
PRKN-207ENST00000479615 FBXO43Q4G163 708 aa16■□□□□ 0.15
PRKN-207ENST00000479615 ELOA2Q8IYF1 753 aaPredicted RBP16■□□□□ 0.15
PRKN-207ENST00000479615 FMR1NBQ8N0W7 255 aaPredicted RBP16■□□□□ 0.15
PRKN-207ENST00000479615 ARL14EPQ8N8R7 260 aaPredicted RBP16■□□□□ 0.15
PRKN-207ENST00000479615 CHAMP1Q96JM3 812 aa16■□□□□ 0.15
PRKN-207ENST00000479615 TIGD1Q96MW7 591 aa16■□□□□ 0.15
PRKN-207ENST00000479615 CYP2S1Q96SQ9 504 aa16■□□□□ 0.15
PRKN-207ENST00000479615 B3GNT5Q9BYG0 378 aa16■□□□□ 0.15
PRKN-207ENST00000479615 EPC1Q9H2F5 836 aa16■□□□□ 0.15
PRKN-207ENST00000479615 DPEP3Q9H4B8 488 aa16■□□□□ 0.15
PRKN-207ENST00000479615 EBF3Q9H4W6 596 aa16■□□□□ 0.15
PRKN-207ENST00000479615 SMYD3Q9H7B4 428 aa16■□□□□ 0.15
PRKN-207ENST00000479615 HPS4Q9NQG7 708 aa16■□□□□ 0.15
PRKN-207ENST00000479615 USP34Q70CQ2 3546 aa16■□□□□ 0.15
PRKN-207ENST00000479615 FAM186AA6NE01 2351 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 NFATC1O95644 943 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 PPP1R2P41236 205 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 CDH8P55286 799 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 TAF10Q12962 218 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 PON2Q15165 354 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 ZCWPW2Q504Y3 356 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 TMEM196Q5HYL7 178 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 ZNF658Q5TYW1 1059 aaPredicted RBP15.99■□□□□ 0.15
PRKN-207ENST00000479615 KRT39Q6A163 491 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 TXNDC11Q6PKC3 985 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 SUMF1Q8NBK3 374 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 TTC8Q8TAM2 541 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 SH3RF2Q8TEC5 729 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 TSG101Q99816 390 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 ZNF518BQ9C0D4 1074 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 ECT2Q9H8V3 914 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 GDPD2Q9HCC8 539 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 MAPK8IP1Q9UQF2 711 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 NME7Q9Y5B8 376 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 COL4A2P08572 1712 aa15.99■□□□□ 0.15
PRKN-207ENST00000479615 MYO15AQ9UKN7 3530 aa15.98■□□□□ 0.15
PRKN-207ENST00000479615 C2orf78A6NCI8 922 aa15.98■□□□□ 0.15
PRKN-207ENST00000479615 OLFM2O95897 454 aa15.98■□□□□ 0.15
PRKN-207ENST00000479615 HLA-DRAP01903 254 aa15.98■□□□□ 0.15
PRKN-207ENST00000479615 EPB41P11171 864 aaKnown RBP15.98■□□□□ 0.15
PRKN-207ENST00000479615 TDGF1P13385 188 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms