RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 ALG6Q9Y672 507 aa12.6□□□□□ -0.39
TM9SF4-206ENST00000479591 MRPL42Q9Y6G3 142 aaKnown RBP12.6□□□□□ -0.39
TM9SF4-206ENST00000479591 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
TM9SF4-206ENST00000479591 MKI67P46013 3256 aaKnown RBP12.6□□□□□ -0.39
TM9SF4-206ENST00000479591 NLRC5Q86WI3 1866 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 PTPRDP23468 1912 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 TMEM110-MUSTN1A8MSY1 372 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 GOLGA8SH3BPF8 625 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 NCK2O43639 380 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 SYN1P17600 705 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 COMTP21964 271 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 EPHB4P54760 987 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 SLC6A3Q01959 620 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 PIGHQ14442 188 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 CCDC142Q17RM4 750 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 RTP2Q5QGT7 225 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 LRRTM3Q86VH5 581 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 FIBCD1Q8N539 461 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 UBL4BQ8N7F7 174 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 COLGALT1Q8NBJ5 622 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 BCL7CQ8WUZ0 217 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 DPF3Q92784 378 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 BTBD6Q96KE9 485 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 MCEEQ96PE7 176 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 OSBPL9Q96SU4 736 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 HERC2P3Q9BVR0 1158 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 GOLPH3Q9H4A6 298 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 LRRC4Q9HBW1 653 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 METTL5Q9NRN9 209 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 SPG21Q9NZD8 308 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 ZMYND8Q9ULU4 1186 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 PCDHB12Q9Y5F1 795 aa12.59□□□□□ -0.39
TM9SF4-206ENST00000479591 KIAA1671Q9BY89 1806 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 CCDC66A2RUB6 948 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 PAPSS1O43252 624 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 SPOPO43791 374 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 TBC1D4O60343 1298 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 FBXO21O94952 628 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 SOD2P04179 222 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 DESP17661 470 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 BDNFP23560 247 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 RPL7AP62424 266 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 ACAP1Q15027 740 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 SLC39A12Q504Y0 691 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 OLFML1Q6UWY5 402 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 VSTM1Q6UX27 236 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 ARCQ7LC44 396 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 NIPA2Q8N8Q9 360 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 C2orf15Q8WU43 125 aaKnown RBP12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 PBKQ96KB5 322 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 RAD9AQ99638 391 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 SMOQ99835 787 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 CHST7Q9NS84 486 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 TMLHEQ9NVH6 421 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 PCDHB5Q9Y5E4 795 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 BACE2Q9Y5Z0 518 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
TM9SF4-206ENST00000479591 PIK3R2O00459 728 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 SART1O43290 800 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 BEST1O76090 585 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 GJB6O95452 261 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 GLI1P08151 1106 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 LCP1P13796 627 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 ATP2A2P16615 1042 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 CTNNA2P26232 953 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 CTNNA1P35221 906 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 RFC1P35251 1148 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 MAGEA11P43364 429 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 MLLT1Q03111 559 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 GPR17Q13304 367 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 RAB41Q5JT25 222 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 EFHC1Q5JVL4 640 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 KIAA1841Q6NSI8 718 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 SLC26A9Q7LBE3 791 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 TAS1R1Q7RTX1 841 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 DDX53Q86TM3 631 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 SCUBE3Q8IX30 993 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 SIX6OS1Q8N1H7 587 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 CEP112Q8N8E3 955 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 ZMIZ2Q8NF64 920 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-206ENST00000479591 CLP1Q92989 425 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms