RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 HPSEQ9Y251 543 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 NME7Q9Y5B8 376 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 C2orf78A6NCI8 922 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 OTOL1A6NHN0 477 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-218ENST00000479554 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-218ENST00000479554 A8MXQ7 604 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 F8VP50 259 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 MBD3O95983 291 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 SYKP43405 635 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 IFNAR2P48551 515 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 PDE6CP51160 858 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 USP46P62068 366 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 GRSF1Q12849 480 aaKnown RBP eCLIP15.27■□□□□ 0.04
ATG4B-218ENST00000479554 NCOA4Q13772 614 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 SLC9A9Q8IVB4 645 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 CPA6Q8N4T0 437 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 ARL14EPQ8N8R7 260 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-218ENST00000479554 B3GALNT2Q8NCR0 500 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 OSCP1Q8WVF1 389 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 ATP2A3Q93084 1043 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 CCDC47Q96A33 483 aaKnown RBP15.27■□□□□ 0.04
ATG4B-218ENST00000479554 EXOC4Q96A65 974 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 C8orf48Q96LL4 319 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 TTLL2Q9BWV7 592 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 KCTD10Q9H3F6 313 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 DUS2Q9NX74 493 aaKnown RBP15.27■□□□□ 0.04
ATG4B-218ENST00000479554 TRPM5Q9NZQ8 1165 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 GMEB2Q9UKD1 530 aa15.27■□□□□ 0.04
ATG4B-218ENST00000479554 GREB1Q4ZG55 1949 aa15.27■□□□□ 0.03
ATG4B-218ENST00000479554 GPR179Q6PRD1 2367 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 CHURC1-FNTBB4DL54 471 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 K7ESF4 209 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 PDXKO00764 312 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 NR3C1P04150 777 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 RPN1P04843 607 aaKnown RBP15.26■□□□□ 0.03
ATG4B-218ENST00000479554 HDCP19113 662 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 FNTBP49356 437 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 NOP14P78316 857 aaKnown RBP15.26■□□□□ 0.03
ATG4B-218ENST00000479554 DMWDQ09019 674 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 ZNF667Q5HYK9 610 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 TMEM196Q5HYL7 178 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 FSTL4Q6MZW2 842 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 SCARA5Q6ZMJ2 495 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 SH3RF2Q8TEC5 729 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 TMEM174Q8WUU8 243 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 CHFRQ96EP1 664 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 ZNF518BQ9C0D4 1074 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 ECT2Q9H8V3 914 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 ARHGAP26Q9UNA1 814 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 WNT6Q9Y6F9 365 aa15.26■□□□□ 0.03
ATG4B-218ENST00000479554 HELZP42694 1942 aaKnown RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 ANAPC1Q9H1A4 1944 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 ATP8B3O60423 1300 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 CALUO43852 315 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 KIF20AO95235 890 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 TCF3P15923 654 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 PFKLP17858 780 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 GJA4P35212 333 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 RAP1GAPP47736 663 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 PPP3CCP48454 512 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 NDUFA8P51970 172 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 CDH8P55286 799 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 CLDN10P78369 228 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 FOXK2Q01167 660 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 CEP135Q66GS9 1140 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 HEATR6Q6AI08 1181 aaKnown RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 PRR23BQ6ZRT6 265 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 ERMP1Q7Z2K6 904 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 GPR161Q8N6U8 529 aaKnown RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 RMDN1Q96DB5 314 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 B3GNT5Q9BYG0 378 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 SCAND2PQ9GZW5 306 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-218ENST00000479554 C2orf42Q9NWW7 574 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 FRMD4BQ9Y2L6 1034 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 DNAH14Q0VDD8 3507 aa15.25■□□□□ 0.03
ATG4B-218ENST00000479554 FAM237AA0A1B0GTK4 181 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 CLDN5O00501 218 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 EGFP01133 1207 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 PRR29P0C7W0 189 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 P4HA1P13674 534 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 DRD1P21728 446 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 CNR2P34972 360 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 DLG4P78352 724 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 IFRD2Q12894 506 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-218ENST00000479554 SIM2Q14190 667 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-218ENST00000479554 LPAL2Q16609 132 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 EML3Q32P44 896 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 LAIR1Q6GTX8 287 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 TMC2Q8TDI7 906 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 TNIP3Q96KP6 325 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 P2RY13Q9BPV8 354 aa15.24■□□□□ 0.03
ATG4B-218ENST00000479554 MED10Q9BTT4 135 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms