RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 HAUS3Q68CZ6 603 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 TTLL5Q6EMB2 1281 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 GALNT5Q7Z7M9 940 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 PDPRQ8NCN5 879 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 TDRD7Q8NHU6 1098 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 VPS16Q9H269 839 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 CHODLQ9H9P2 273 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 DNMT3BQ9UBC3 853 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 HPSEQ9Y251 543 aa8.34□□□□□ -1.07
GAPVD1-217ENST00000479511 RUSC2Q8N2Y8 1516 aa8.34□□□□□ -1.08
GAPVD1-217ENST00000479511 ORC4O43929 436 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 WNT11O96014 354 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 CHEK2O96017 543 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 POMCP01189 267 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 GLI1P08151 1106 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 ALAS1P13196 640 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 AKT1P31749 480 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 INSCQ1MX18 579 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 ACAD10Q6JQN1 1059 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 USP30Q70CQ3 517 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 ANKS1BQ7Z6G8 1248 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 XYLT1Q86Y38 959 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 RASGRP3Q8IV61 690 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 REXO1L1PQ8IX06 675 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 TBC1D15Q8TC07 691 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 RSC1A1Q92681 617 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 C7orf26Q96N11 449 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 SPATA25Q9BR10 227 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 L2HGDHQ9H9P8 463 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 ANKEF1Q9NU02 776 aa8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 ORC3Q9UBD5 711 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-217ENST00000479511 CD109Q6YHK3 1445 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 OR2W5A6NFC9 320 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 E7EVH7 732 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 PPP6R2O75170 966 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 RTN3O95197 1032 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 USP10Q14694 798 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 CSRP2Q16527 193 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 MEA1Q16626 185 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 TSTQ16762 297 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 VWA3BQ502W6 1294 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 WDR45BQ5MNZ6 344 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 TTC22Q5TAA0 569 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 CACHD1Q5VU97 1274 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 ARMC3Q5W041 872 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 TMEM57Q8N5G2 664 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 GOLGA1Q92805 767 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 C3orf49Q96BT1 292 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 SLC46A1Q96NT5 459 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 SDF4Q9BRK5 362 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 SGPP1Q9BX95 441 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 TTYH3Q9C0H2 523 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 ELAC1Q9H777 363 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 KCNK12Q9HB15 430 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 G6PC2Q9NQR9 355 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 FSCN3Q9NQT6 498 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 GPR34Q9UPC5 381 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 CDY1Q9Y6F8 540 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 ERICH3Q5RHP9 1530 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 ARAP3Q8WWN8 1544 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 STRCQ7RTU9 1775 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 UHRF1BP1LA0JNW5 1464 aa8.32□□□□□ -1.08
GAPVD1-217ENST00000479511 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 J3KTA2 159 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 DHHO43323 396 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 DOK2O60496 412 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 TIPRLO75663 272 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 PIAS2O75928 621 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 PRSS23O95084 383 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 CNPP09543 421 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 CYP2C9P11712 490 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 XRCC6P12956 609 aaKnown RBP eCLIP8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 SLC5A2P31639 672 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 HSPA1LP34931 641 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 ATXN1P54253 815 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 NPEPPSP55786 919 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 ATP1A4Q13733 1029 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 TRIM60Q495X7 471 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 RINT1Q6NUQ1 792 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 NFRKBQ6P4R8 1299 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 RAB11FIP2Q7L804 512 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 NRSN1Q8IZ57 195 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 TREX2Q9BQ50 279 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 REEP2Q9BRK0 252 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 TLR10Q9BXR5 811 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 SLC46A2Q9BY10 475 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 SIK2Q9H0K1 926 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 SLC25A32Q9H2D1 315 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 ABHD16BQ9H3Z7 469 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 IL23AQ9NPF7 189 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 ZSCAN32Q9NX65 697 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 ETAA1Q9NY74 926 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 FAM30AQ9NZY2 134 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 TTLL3Q9Y4R7 772 aa8.31□□□□□ -1.08
GAPVD1-217ENST00000479511 AQP7P3A6NL99 342 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms