RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 POU5F1BQ06416 359 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 TRIM67Q6ZTA4 783 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 LRRC6Q86X45 466 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 RIOX2Q8IUF8 465 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 ASB7Q9H672 318 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 TMEM134Q9H6X4 195 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 ANGPTL3Q9Y5C1 460 aa14.93□□□□□ -0.02
COL20A1-206ENST00000479501 NFASCO94856 1347 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 FAM200BP0CF97 657 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 HSPA8P11142 646 aaKnown RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 KRT4P19013 534 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 CPT1AP50416 773 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 CDH8P55286 799 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 AADACL2Q6P093 401 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 MFSD7Q6UXD7 560 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 SPATA2LQ8IUW3 424 aaPredicted RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 C12orf56Q8IXR9 622 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 EXT2Q93063 718 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 RGPD5Q99666 1765 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 IGF2BP3O00425 579 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 RIPK2O43353 540 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 HNRNPCL1O60812 293 aaKnown RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 CELF2O95319 508 aaKnown RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 GRIK1P39086 918 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 NCKAP1LP55160 1127 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 PDK2Q15119 407 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 FAM172AQ8WUF8 416 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 DACT3Q96B18 629 aaPredicted RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 HES6Q96HZ4 224 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 GPRC5DQ9NZD1 345 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 NCANO14594 1321 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 MYH2Q9UKX2 1941 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 NVLO15381 856 aaKnown RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 TNFRSF8P28908 595 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 VCPP55072 806 aaKnown RBP14.92□□□□□ -0.02
COL20A1-206ENST00000479501 OCRLQ01968 901 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 C16orf87Q6PH81 154 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 MTHFD1LQ6UB35 978 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 IFT43Q96FT9 208 aa14.92□□□□□ -0.02
COL20A1-206ENST00000479501 ADAMTSL3P82987 1691 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 CALCAP01258 141 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 ZNF286BP0CG31 522 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 KCNA3P22001 575 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 PRAMEP78395 509 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 FMO1Q01740 532 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 CACNB2Q08289 660 aaPredicted RBP14.91□□□□□ -0.02
COL20A1-206ENST00000479501 ACAD11Q709F0 780 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 SP110Q9HB58 689 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 PCMTD2Q9NV79 361 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 GPATCH2LQ9NWQ4 482 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 SPATA31C2B4DYI2 1134 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 TRAPPC3O43617 180 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 LCA5LO95447 670 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 SYF2O95926 243 aaKnown RBP14.91□□□□□ -0.02
COL20A1-206ENST00000479501 CPB1P15086 417 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 FECHP22830 423 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 ZACNQ401N2 412 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 DLGAP2Q9P1A6 1054 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 WARS2Q9UGM6 360 aaKnown RBP14.91□□□□□ -0.02
COL20A1-206ENST00000479501 BARX2Q9UMQ3 279 aaPredicted RBP14.91□□□□□ -0.02
COL20A1-206ENST00000479501 GJB6O95452 261 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 MED21Q13503 144 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 NDUFAF2Q8N183 169 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 SPON2Q9BUD6 331 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 UBN1Q9NPG3 1134 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 ORC6Q9Y5N6 252 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 TRIM49D1C9J1S8 452 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 GRIN3BO60391 1043 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 NCAM1P13591 858 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
COL20A1-206ENST00000479501 RTP1P59025 263 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 STX3Q13277 289 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 ZNF268Q14587 947 aaPredicted RBP14.91□□□□□ -0.02
COL20A1-206ENST00000479501 TEX9Q8N6V9 391 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 OSMRQ99650 979 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 PCDH9Q9HC56 1237 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 KRT82Q9NSB4 513 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 SETD4Q9NVD3 440 aa14.91□□□□□ -0.02
COL20A1-206ENST00000479501 M0QYT0 321 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 CCNE2O96020 404 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 NDST1P52848 882 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 KDSRQ06136 332 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 NFIL3Q16649 462 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 CNPY4Q8N129 248 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 POLIQ9UNA4 740 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 SNED1Q8TER0 1413 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 IRF6O14896 467 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 CYP1A2P05177 515 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 BCAT1P54687 386 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 MBOAT7Q96N66 472 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 RNF103-CHMP3A0A140T963 221 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 AP3B1O00203 1094 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 STRNO43815 780 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 LRRC36Q1X8D7 754 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 USP33Q8TEY7 942 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms