RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 E2F6O75461 281 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 MT-ND3P03897 115 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 CFHP08603 1231 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 HALP42357 657 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 ALDH1A3P47895 512 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 CDKL1Q00532 357 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 APOFQ13790 326 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 HIF1AQ16665 826 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 C6orf52Q5T4I8 152 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 SYCP2LQ5T4T6 812 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 INTS5Q6P9B9 1019 aaKnown RBP10.27□□□□□ -0.77
COL13A1-207ENST00000478219 CENPUQ71F23 418 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 RHPN2Q8IUC4 686 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 ALLCQ8N6M5 410 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 FBXO36Q8NEA4 188 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 GIPC3Q8TF64 312 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 PYROXD1Q8WU10 500 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 RILPQ96NA2 401 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 NAP1L4Q99733 375 aaKnown RBP10.27□□□□□ -0.77
COL13A1-207ENST00000478219 ARMC7Q9H6L4 198 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 ACSS3Q9H6R3 686 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 PARVGQ9HBI0 331 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 GINM1Q9NU53 330 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 MTMR4Q9NYA4 1195 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 WRAP73Q9P2S5 460 aaPredicted RBP10.27□□□□□ -0.77
COL13A1-207ENST00000478219 VAV3Q9UKW4 847 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 POLIQ9UNA4 740 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 ZNF335Q9H4Z2 1342 aaPredicted RBP10.27□□□□□ -0.77
COL13A1-207ENST00000478219 NHSQ6T4R5 1651 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 CDK5RAP2Q96SN8 1893 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 HTR3EA5X5Y0 456 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CASQ2O14958 399 aaPredicted RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MSH4O15457 936 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 DENRO43583 198 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CCNT2O60583 730 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TOP3BO95985 862 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SNHG28P0DPA3 235 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 AKR1B1P15121 316 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 ATF7P17544 494 aaPredicted RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 NELFEP18615 380 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 VAMP7P51809 220 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 NRLP54845 237 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 GDF10P55107 478 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 ARHGAP4P98171 946 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 RELAQ04206 551 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CD300CQ08708 224 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 ZNF543Q08ER8 600 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 NFIL3Q16649 462 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 PARP10Q53GL7 1025 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 OGFRL1Q5TC84 451 aaPredicted RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 PGM2L1Q6PCE3 622 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TPH2Q8IWU9 490 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 FAM178BQ8IXR5 827 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SLFN12Q8IYM2 578 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SHC3Q92529 594 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MBOAT7Q96N66 472 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 BTBD9Q96Q07 612 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 FOXP3Q9BZS1 431 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CDH22Q9UJ99 828 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 AFG3L2Q9Y4W6 797 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 AP4B1Q9Y6B7 739 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MAD1L1Q9Y6D9 718 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SF3B1O75533 1304 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CYP3A7-CYP3A51PA0A087WV96 503 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SH3PXD2BA1X283 911 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MEIS2O14770 477 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CHMP2AO43633 222 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TRPA1O75762 1119 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 LDHBP07195 334 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SRGAP2CP0DJJ0 459 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 SRGAP2BP0DMP2 458 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 EEF2P13639 858 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 RFX1P22670 979 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CYP3A7P24462 503 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 NOVP48745 357 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TMPRSS15P98073 1019 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 PTK7Q13308 1070 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 C16orf72Q14CZ0 275 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MORF4L2Q15014 288 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TGFBIQ15582 683 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 ODR4Q5SWX8 454 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MFSD4BQ5TF39 518 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TXNRD3NBQ6F5E7 133 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 GRAMD4Q6IC98 578 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MCOLN2Q8IZK6 566 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 GPR101Q96P66 508 aaPredicted RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 MRPS26Q9BYN8 205 aaKnown RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 C1orf21Q9H246 121 aa10.26□□□□□ -0.77
COL13A1-207ENST00000478219 FAF1Q9UNN5 650 aaPredicted RBP10.26□□□□□ -0.77
COL13A1-207ENST00000478219 A0A0B4J269 797 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms