RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 EP400NLQ6ZTU2 488 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 TMC6Q7Z403 805 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 FAM35AQ86V20 835 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 TCEAL8Q8IYN2 117 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 C12orf76Q8N812 135 aaPredicted RBP12.15□□□□□ -0.46
CBWD3-206ENST00000478048 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 MRFAP1L1Q96HT8 127 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 SEPT5Q99719 369 aaPredicted RBP12.15□□□□□ -0.46
CBWD3-206ENST00000478048 MED10Q9BTT4 135 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 NUP58Q9BVL2 599 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 PRRG1O14668 218 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 TBX10O75333 385 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 BEST1O76090 585 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ADCY5O95622 1261 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 HAPLN1P10915 354 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-206ENST00000478048 GNA15P30679 374 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 CASP14P31944 242 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 LTBRP36941 435 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 STAT1P42224 750 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ARID5AQ03989 594 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 GOLGA8FQ08AF8 430 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 GOLGA8DPQ0D2H9 430 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 DDR2Q16832 855 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 SGO2Q562F6 1265 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 TMEM184AQ6ZMB5 413 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 STKLD1Q8NE28 680 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 GPR152Q8TDT2 470 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 C2orf15Q8WU43 125 aaKnown RBP12.14□□□□□ -0.47
CBWD3-206ENST00000478048 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
CBWD3-206ENST00000478048 KCNK16Q96T55 309 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 SPSB2Q99619 263 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
CBWD3-206ENST00000478048 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 TSPAN16Q9UKR8 245 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 CAPN11Q9UMQ6 739 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 YIPF1Q9Y548 306 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.14□□□□□ -0.47
CBWD3-206ENST00000478048 COL6A3P12111 3177 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 O00370 1275 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 THAP12O43422 761 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ZMYND10O75800 440 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 C1RP00736 705 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ATF6P18850 670 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ZMIZ2Q8NF64 920 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 EPS8L1Q8TE68 723 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ZNF606Q8WXB4 792 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 CASP10Q92851 521 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 SMOQ99835 787 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 APOL5Q9BWW9 433 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 EDEM3Q9BZQ6 932 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 ABCB6Q9NP58 842 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 KRT82Q9NSB4 513 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
CBWD3-206ENST00000478048 INSL5Q9Y5Q6 135 aa12.14□□□□□ -0.47
CBWD3-206ENST00000478048 A0A1W2PQJ5 194 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 F8VP50 259 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 AP1G2O75843 785 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 CYP11B1P15538 503 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 MAP3K7CLP57077 242 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 PTK2Q05397 1052 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 TWF1Q12792 350 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 TBX2Q13207 712 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-206ENST00000478048 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
CBWD3-206ENST00000478048 CNGA2Q16280 664 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 GOLGA7BQ2TAP0 167 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
CBWD3-206ENST00000478048 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 ANKRD54Q6NXT1 300 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 SYCE2Q6PIF2 218 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 CCDC149Q6ZUS6 474 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 NOP9Q86U38 636 aaKnown RBP12.13□□□□□ -0.47
CBWD3-206ENST00000478048 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 HDAC7Q8WUI4 952 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 PABPC5Q96DU9 382 aaKnown RBP12.13□□□□□ -0.47
CBWD3-206ENST00000478048 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 CDH22Q9UJ99 828 aa12.13□□□□□ -0.47
CBWD3-206ENST00000478048 C2orf16Q68DN1 1984 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 CCDC195A0A1B0GUA6 201 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 TULP2O00295 520 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 CCL16O15467 120 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 MICAL2O94851 1124 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 FAM200BP0CF97 657 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 KRT9P35527 623 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 GRIK1P39086 918 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 MAGEA11P43364 429 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 TUFMP49411 452 aaKnown RBP12.12□□□□□ -0.47
CBWD3-206ENST00000478048 ZBED6P86452 979 aa12.12□□□□□ -0.47
CBWD3-206ENST00000478048 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms