RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TRAV19A0A0A6YYK7 116 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 TTC26A0AVF1 554 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 C2orf78A6NCI8 922 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 FAM205CA6NFA0 338 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 PPEF2O14830 753 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 APODP05090 189 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 CKMP06732 381 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 ODC1P11926 461 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 HDCP19113 662 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 NPTX2P47972 431 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 GPR15P49685 360 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 GUCY2FP51841 1108 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 CXADRP78310 365 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 RHDQ02161 417 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 RTP5Q14D33 572 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 DHCR24Q15392 516 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 PKDCCQ504Y2 493 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 SDHAF4Q5VUM1 108 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 RHBDF2Q6PJF5 856 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 IL27RAQ6UWB1 636 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 KIAA1958Q8N8K9 716 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 C1orf216Q8TAB5 229 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 BAP1Q92560 729 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 KIFAP3Q92845 792 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 FOXJ1Q92949 421 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 TRMT2BQ96GJ1 504 aaKnown RBP7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 FAM117AQ9C073 453 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 NRSN2Q9GZP1 204 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 TRPC7Q9HCX4 862 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 TUFT1Q9NNX1 390 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 ARHGEF4Q9NR80 690 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 ABI2Q9NYB9 513 aaPredicted RBP7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 ARHGAP28Q9P2N2 729 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 UBQLN1Q9UMX0 589 aaKnown RBP7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 CYP8B1Q9UNU6 501 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 COL6A6A6NMZ7 2263 aa7.91□□□□□ -1.14
SPTLC1-205ENST00000477888 GOLGA4Q13439 2230 aaKnown RBP7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PTPRBP23467 1997 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PTPRDP23468 1912 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PHLPP2Q6ZVD8 1323 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 ARHGEF35A5YM69 484 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 CCDC169A6NNP5 214 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PIRO00625 290 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 SLC28A2O43868 658 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 NDUFS2O75306 463 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 TOM1L1O75674 476 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 NOL4O94818 638 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 CER1O95813 267 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 CXCL8P10145 99 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 HARSP12081 509 aaKnown RBP7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 NDUFV2P19404 249 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PAX3P23760 479 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 MATKP42679 507 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 IL12RB1P42701 662 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 LY6DQ14210 128 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 SAFBQ15424 915 aaKnown RBP eCLIP7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 CALCRLQ16602 461 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PREPLQ4J6C6 727 aaPredicted RBP7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 FILIP1Q7Z7B0 1213 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 MIB1Q86YT6 1006 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 FGF11Q92914 225 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 KCNB2Q92953 911 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 CD93Q9NPY3 652 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 GJB4Q9NTQ9 266 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 TMLHEQ9NVH6 421 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 UXTQ9UBK9 157 aaPredicted RBP7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 IL17BQ9UHF5 180 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 PCDHB5Q9Y5E4 795 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 AK5Q9Y6K8 562 aa7.9□□□□□ -1.14
SPTLC1-205ENST00000477888 KNTC1P50748 2209 aa7.9□□□□□ -1.15
SPTLC1-205ENST00000477888 ADAMTS9Q9P2N4 1935 aa7.9□□□□□ -1.15
SPTLC1-205ENST00000477888 TBC1D3BA6NDS4 549 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 LACTBL1A8MY62 500 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 LEFTY2O00292 366 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 WNT7AO00755 349 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 BCAT2O15382 392 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 ADRB2P07550 413 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 NFICP08651 508 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 CLTAP09496 248 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 HOXB2P14652 356 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 JUPP14923 745 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 RPA1P27694 616 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 PEX3P56589 373 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 ATP2C1P98194 919 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 MCL1Q07820 350 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 KCNH2Q12809 1159 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 RESTQ13127 1097 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 TARDBPQ13148 414 aaKnown RBP eCLIP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 DDR2Q16832 855 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 SPATA1Q5VX52 437 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 TRMT11Q7Z4G4 463 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 DAW1Q8N136 415 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 THEM5Q8N1Q8 247 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 ZCCHC9Q8N567 271 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms