RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 AP3M2P53677 418 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 BIRC3Q13489 604 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 ZBTB6Q15916 424 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 SH3PXD2AQ5TCZ1 1133 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 FAM171A1Q5VUB5 890 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 TDRD10Q5VZ19 366 aaKnown RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 SCARA3Q6AZY7 606 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 SARM1Q6SZW1 724 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 NT5DC4Q86YG4 428 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 BEST2Q8NFU1 509 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 CACTINQ8WUQ7 758 aaKnown RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 TSPAN18Q96SJ8 248 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 TRIM5Q9C035 493 aa12.36□□□□□ -0.43
LSM2-212ENST00000477182 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 C8orf33Q9H7E9 229 aaPredicted RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
LSM2-212ENST00000477182 ADAMTS20P59510 1910 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 ZNF263O14978 683 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
LSM2-212ENST00000477182 PHACTR2O75167 634 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 VNN1O95497 513 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 CEBPBP17676 345 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 CSRP1P21291 193 aaKnown RBP12.35□□□□□ -0.43
LSM2-212ENST00000477182 UBXN1Q04323 297 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 NR1I3Q14994 352 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 NAB2Q15742 525 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 SLC5A9Q2M3M2 681 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 ZACNQ401N2 412 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 FAM78AQ5JUQ0 283 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 FKBP15Q5T1M5 1219 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 KRT39Q6A163 491 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 KBTBD6Q86V97 674 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 SYNPOQ8N3V7 929 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 C1orf127Q8N9H9 656 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 ZC3H10Q96K80 434 aaKnown RBP12.35□□□□□ -0.43
LSM2-212ENST00000477182 ASB16Q96NS5 453 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 GOLGA2P5Q9HBQ8 144 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 DPP3Q9NY33 737 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 CACNG4Q9UBN1 327 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 NEUROG3Q9Y4Z2 214 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 AKAP13Q12802 2813 aa12.35□□□□□ -0.43
LSM2-212ENST00000477182 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 C4orf47A7E2U8 309 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 CBFA2T2O43439 604 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 LRG1P02750 347 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 ITGB3P05106 788 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 KRT19P08727 400 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
LSM2-212ENST00000477182 OR1D2P34982 312 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 ZNF75DP51815 510 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
LSM2-212ENST00000477182 VITQ6UXI7 678 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 GBP6Q6ZN66 633 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 SMARCD2Q92925 531 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 SMOC1Q9H4F8 434 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.43
LSM2-212ENST00000477182 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
LSM2-212ENST00000477182 SIX4Q9UIU6 781 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
LSM2-212ENST00000477182 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
LSM2-212ENST00000477182 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 PPEF2O14830 753 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 PMM2O15305 246 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 P4HA2O15460 535 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 ADAM12O43184 909 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 TOP3BO95985 862 aaKnown RBP12.33□□□□□ -0.44
LSM2-212ENST00000477182 TPM3P06753 285 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 CYP3A5P20815 502 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 KLK7P49862 253 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 KPNA1P52294 538 aaPredicted RBP12.33□□□□□ -0.44
LSM2-212ENST00000477182 TUSC3Q13454 348 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 TRPC3Q13507 836 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 NCOA4Q13772 614 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 SYCP1Q15431 976 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 PRSS36Q5K4E3 855 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.44
LSM2-212ENST00000477182 Q6ZS52 159 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 MFSD6LQ8IWD5 586 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 FBXL13Q8NEE6 735 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 CXorf38Q8TB03 319 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
LSM2-212ENST00000477182 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
LSM2-212ENST00000477182 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms