RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 KIF9Q9HAQ2 790 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.41
VARS2-208ENST00000477052 NXF1Q9UBU9 619 aaKnown RBP12.46□□□□□ -0.41
VARS2-208ENST00000477052 GREB1Q4ZG55 1949 aa12.46□□□□□ -0.42
VARS2-208ENST00000477052 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
VARS2-208ENST00000477052 RPP40O75818 363 aaKnown RBP12.45□□□□□ -0.42
VARS2-208ENST00000477052 CLSTN1O94985 981 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 MAGEA11P43364 429 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 CDH8P55286 799 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 MESP2Q0VG99 397 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 ZNF268Q14587 947 aaPredicted RBP12.45□□□□□ -0.42
VARS2-208ENST00000477052 PSMD6Q15008 389 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 SURF1Q15526 300 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 CSRP2Q16527 193 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 WDR72Q3MJ13 1102 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 DPH6Q7L8W6 267 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 CPA6Q8N4T0 437 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 FUBP3Q96I24 572 aaKnown RBP eCLIP12.45□□□□□ -0.42
VARS2-208ENST00000477052 CNTNAP3BQ96NU0 1288 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 FNBP1Q96RU3 617 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 B3GNT5Q9BYG0 378 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 CNTNAP3Q9BZ76 1288 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 LRRC27Q9C0I9 530 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.45□□□□□ -0.42
VARS2-208ENST00000477052 ZMYM5Q9UJ78 669 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 PCDHA7Q9UN72 937 aa12.45□□□□□ -0.42
VARS2-208ENST00000477052 EML5Q05BV3 1969 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 LEFTY2O00292 366 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
VARS2-208ENST00000477052 YEATS4O95619 227 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 ZSCAN22P10073 491 aaPredicted RBP12.44□□□□□ -0.42
VARS2-208ENST00000477052 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
VARS2-208ENST00000477052 ANXA13P27216 316 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 HOXA6P31267 233 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 CNR2P34972 360 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 ME1P48163 572 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 TNNC1P63316 161 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 AMPD3Q01432 767 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 EHHADHQ08426 723 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 TAF10Q12962 218 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 ORC1Q13415 861 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 DENND5BQ6ZUT9 1274 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 UNC13DQ70J99 1090 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 FSIP1Q8NA03 581 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 XXYLT1Q8NBI6 393 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 SPATA18Q8TC71 538 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 GAB3Q8WWW8 586 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 CD101Q93033 1021 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 ATP2A3Q93084 1043 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 SPATA17Q96L03 361 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 RTKNQ9BST9 563 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 CUEDC2Q9H467 287 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 KIAA1586Q9HCI6 787 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 ZDHHC4Q9NPG8 344 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 TRPM5Q9NZQ8 1165 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 SERTAD1Q9UHV2 236 aa12.44□□□□□ -0.42
VARS2-208ENST00000477052 PTPRDP23468 1912 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 ZNF840PA6NDX5 716 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 A8MXQ7 604 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 PHACTR2O75167 634 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 F13A1P00488 732 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 DRD1P21728 446 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 OPRD1P41143 372 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 SLC6A11P48066 632 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
VARS2-208ENST00000477052 TRPC3Q13507 836 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 DMC1Q14565 340 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 GAB4Q2WGN9 574 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 C2orf27AQ580R0 203 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 PPM1JQ5JR12 505 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
VARS2-208ENST00000477052 RESP18Q5W5W9 173 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 TCEAL6Q6IPX3 200 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 CNNM4Q6P4Q7 775 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 VSTM1Q6UX27 236 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 CACNA2D4Q7Z3S7 1137 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 FILIP1Q7Z7B0 1213 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 CCDC33Q8N5R6 958 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 TCEAL3Q969E4 200 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 KCNK16Q96T55 309 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 TPSD1Q9BZJ3 242 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 SDCBP2Q9H190 292 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 ARHGAP26Q9UNA1 814 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 CPQQ9Y646 472 aa12.43□□□□□ -0.42
VARS2-208ENST00000477052 HELZP42694 1942 aaKnown RBP12.43□□□□□ -0.42
VARS2-208ENST00000477052 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 LRRIQ3A6PVS8 624 aaPredicted RBP12.42□□□□□ -0.42
VARS2-208ENST00000477052 SOBPA7XYQ1 873 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 K7EQS6 105 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 SLC30A4O14863 429 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 KLRC4O43908 158 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 EXOC3O60645 756 aa12.42□□□□□ -0.42
VARS2-208ENST00000477052 ATG13O75143 517 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms