RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 SCN4BQ8IWT1 228 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 ELOA2Q8IYF1 753 aaPredicted RBP20.33■□□□□ 0.85
GMDS-204ENST00000476972 SPEM1Q8N4L4 309 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 MYCBPAPQ8TBZ2 947 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 EEF2KMTQ96G04 330 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 MSANTD3Q96H12 275 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 PCED1BQ96HM7 432 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 ZFYVE19Q96K21 471 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 CHMP5Q9NZZ3 219 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 MAGEC2Q9UBF1 373 aaPredicted RBP20.33■□□□□ 0.85
GMDS-204ENST00000476972 RAB23Q9ULC3 237 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 MAGED2Q9UNF1 606 aaPredicted RBP20.33■□□□□ 0.85
GMDS-204ENST00000476972 GREB1Q4ZG55 1949 aa20.33■□□□□ 0.84
GMDS-204ENST00000476972 DPYSL4O14531 572 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 NOL4O94818 638 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 HLA-DRAP01903 254 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 BDNFP23560 247 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 GCLMP48507 274 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 CDH8P55286 799 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 NLRP12P59046 1061 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 ENPEPQ07075 957 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 PPP3CAQ08209 521 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 DMWDQ09019 674 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 WDR44Q5JSH3 913 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 TXNDC11Q6PKC3 985 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 SDCBP2Q9H190 292 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 TASP1Q9H6P5 420 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 GTSE1Q9NYZ3 720 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 FANCMQ8IYD8 2048 aa20.32■□□□□ 0.84
GMDS-204ENST00000476972 MIA3Q5JRA6 1907 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 A8MXQ7 604 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 CHURC1-FNTBB4DL54 471 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 SPECC1L-ADORA2AF8WAN1 911 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 HRO43593 1189 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 PRAMEF12O95522 483 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 ASS1P00966 412 aaKnown RBP20.31■□□□□ 0.84
GMDS-204ENST00000476972 F11P03951 625 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 PTPN1P18031 435 aaKnown RBP20.31■□□□□ 0.84
GMDS-204ENST00000476972 FNTBP49356 437 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 PMS1P54277 932 aaKnown RBP20.31■□□□□ 0.84
GMDS-204ENST00000476972 SPEM2Q0P670 501 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 LRRC32Q14392 662 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 SGSM1Q2NKQ1 1148 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 LAIR1Q6GTX8 287 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 SPOPLQ6IQ16 392 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 C1orf228Q6PIY5 440 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 VSTM1Q6UX27 236 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 PRR23BQ6ZRT6 265 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 B3GALNT2Q8NCR0 500 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 TRMT2BQ96GJ1 504 aaKnown RBP20.31■□□□□ 0.84
GMDS-204ENST00000476972 TSG101Q99816 390 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 MMRN2Q9H8L6 949 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 MAN1B1Q9UKM7 699 aa20.31■□□□□ 0.84
GMDS-204ENST00000476972 CDV3Q9UKY7 258 aaKnown RBP20.31■□□□□ 0.84
GMDS-204ENST00000476972 SPTBN2O15020 2390 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 CETN3O15182 167 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 TADA3O75528 432 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 RETP07949 1114 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 EPB41P11171 864 aaKnown RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 P4HA1P13674 534 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 ANP32AP39687 249 aaKnown RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 SIM2Q14190 667 aaPredicted RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 ARHGAP29Q52LW3 1261 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 ISM2Q6H9L7 571 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 Q6ZS52 159 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 RALGPS2Q86X27 583 aaPredicted RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 TAF4BQ92750 862 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 GTPBP4Q9BZE4 634 aaKnown RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.3■□□□□ 0.84
GMDS-204ENST00000476972 C2orf42Q9NWW7 574 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 OBP2AQ9NY56 170 aa20.3■□□□□ 0.84
GMDS-204ENST00000476972 UXTQ9UBK9 157 aaPredicted RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 KIF26AQ9ULI4 1882 aaPredicted RBP20.3■□□□□ 0.84
GMDS-204ENST00000476972 DCDC2BA2VCK2 349 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 TRIM49BA6NDI0 452 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 K7ESF4 209 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 WEE1P30291 646 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 CTHP32929 405 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 GRIK1P39086 918 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 ASPAP45381 313 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 TNK2Q07912 1038 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 SRSF5Q13243 272 aaKnown RBP20.29■□□□□ 0.84
GMDS-204ENST00000476972 DGKKQ5KSL6 1271 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 ANKRD40Q6AI12 368 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 ZC3H3Q8IXZ2 948 aaKnown RBP20.29■□□□□ 0.84
GMDS-204ENST00000476972 TAS1R2Q8TE23 839 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 MYRFLQ96LU7 910 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 SLC46A2Q9BY10 475 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 TMEM8AQ9HCN3 771 aa20.29■□□□□ 0.84
GMDS-204ENST00000476972 ANAPC1Q9H1A4 1944 aa20.28■□□□□ 0.84
GMDS-204ENST00000476972 F8VP50 259 aa20.28■□□□□ 0.84
GMDS-204ENST00000476972 CLDN5O00501 218 aa20.28■□□□□ 0.84
GMDS-204ENST00000476972 TRIM66O15016 1216 aa20.28■□□□□ 0.84
GMDS-204ENST00000476972 PAPSS2O95340 614 aaPredicted RBP20.28■□□□□ 0.84
GMDS-204ENST00000476972 CD44P16070 742 aaKnown RBP20.28■□□□□ 0.84
GMDS-204ENST00000476972 DDX6P26196 483 aaKnown RBP eCLIP20.28■□□□□ 0.84
GMDS-204ENST00000476972 HOXC13P31276 330 aa20.28■□□□□ 0.84
GMDS-204ENST00000476972 CACNA2D1P54289 1103 aa20.28■□□□□ 0.84
GMDS-204ENST00000476972 MCCD1P59942 119 aaPredicted RBP20.28■□□□□ 0.84
GMDS-204ENST00000476972 NOP14P78316 857 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms