RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 DCAF12L1Q5VU92 463 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 NPAS4Q8IUM7 802 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 MAIP1Q8WWC4 291 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 KRT35Q92764 455 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 RHOXF2Q9BQY4 288 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
CDKAL1-203ENST00000476517 KRIT1O00522 736 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 HCRTO43612 131 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 FGGP02679 453 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PFKMP08237 780 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 NPR3P17342 541 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 COL9A1P20849 921 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 GPD1P21695 349 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 ACAT1P24752 427 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PLA2G4AP47712 749 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PSEN1P49768 467 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 RGS7P49802 495 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PEX5P50542 639 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 TSPY1Q01534 308 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 HADHQ16836 314 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 MDH1BQ5I0G3 518 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 LRRC38Q5VT99 294 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 SLC35F5Q8WV83 523 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 ALG3Q92685 438 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 SCLYQ96I15 445 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 HSFY1Q96LI6 401 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 PAAF1Q9BRP4 392 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 TRIM7Q9C029 511 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 KRT82Q9NSB4 513 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 TMEM39AQ9NV64 488 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 DDX56Q9NY93 547 aaKnown RBP13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 SMARCAL1Q9NZC9 954 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 TBX21Q9UL17 535 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 MTUS1Q9ULD2 1270 aa13.04□□□□□ -0.32
CDKAL1-203ENST00000476517 RNF8O76064 485 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 GJB6O95452 261 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 GJC1P36383 396 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 BRCC3P46736 316 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 OR1G1P47890 313 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 CCL23P55773 120 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 SLC6A3Q01959 620 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 ZNF211Q13398 564 aaPredicted RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 BRD3Q15059 726 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 MAP9Q49MG5 647 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 INTS6LQ5JSJ4 861 aaKnown RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 OVOS1Q6IE37 1185 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 POLNQ7Z5Q5 900 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 MTERF4Q7Z6M4 381 aaKnown RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 TMEM110Q86TL2 294 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 CCDC50Q8IVM0 306 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 LRRC43Q8N309 656 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 MYCBPAPQ8TBZ2 947 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 DIS3LQ8TF46 1054 aaKnown RBP13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 ACBD6Q9BR61 282 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 TMEM175Q9BSA9 504 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 ASNSD1Q9NWL6 643 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 TJP2Q9UDY2 1190 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 TMEM59LQ9UK28 342 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 PLXNA3P51805 1871 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
CDKAL1-203ENST00000476517 PTPRSQ13332 1948 aa13.02□□□□□ -0.32
CDKAL1-203ENST00000476517 CCDC151A5D8V7 595 aa13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 I3L4J1 428 aa13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 DPYSL4O14531 572 aa13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 SYN3O14994 580 aa13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 KRT1P04264 644 aa13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 KRT7P08729 469 aa13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 H2AFXP16104 143 aaPredicted RBP13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
CDKAL1-203ENST00000476517 CYP2C18P33260 490 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms