RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ANKFY1Q9P2R3 1169 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 KCNG1Q9UIX4 513 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 CCPG1Q9ULG6 757 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 SMG5Q9UPR3 1016 aaKnown RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 CHKBQ9Y259 395 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 RIPK3Q9Y572 518 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 CEP83Q9Y592 693 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ASB14A6NK59 587 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 C3orf70A6NLC5 250 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 SIGLEC16A6NMB1 481 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 ZNF862O60290 1169 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 HNRNPCL1O60812 293 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 PQBP1O60828 265 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 DNAJC6O75061 913 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 PEX11AO75192 247 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 DUSP11O75319 330 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 TGDSO95455 350 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 VNN1O95497 513 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 GH1P01241 217 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 ITGAVP06756 1048 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 CLTBP09497 229 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 C6orf222P0C671 652 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 MMP8P22894 467 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 CST5P28325 142 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 MAGEA4P43358 317 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 POLGP54098 1239 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 CDK18Q07002 472 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 ZNF252P-AS1Q0IIN9 211 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 BLMHQ13867 455 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 MORF4L2Q15014 288 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 MAP7D1Q3KQU3 841 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 WDR72Q3MJ13 1102 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 RNASEH2BQ5TBB1 312 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 NUGGCQ68CJ6 796 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 CCDC174Q6PII3 467 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 USP37Q86T82 979 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 TBC1D1Q86TI0 1168 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 VSIG10LQ86VR7 867 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 APLFQ8IW19 511 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 RCOR2Q8IZ40 523 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 GPD1LQ8N335 351 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 ALLCQ8N6M5 410 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 PCSK9Q8NBP7 692 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 C1orf54Q8WWF1 131 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 LENG1Q96BZ8 264 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 GPRASP2Q96D09 838 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 PDCD2LQ9BRP1 358 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 MRPL47Q9HD33 250 aaKnown RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 CNTN3Q9P232 1028 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 KLHL14Q9P2G3 628 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 ANAPC7Q9UJX3 599 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 ANAPC5Q9UJX4 755 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 GRID1Q9ULK0 1009 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 CORO1CQ9ULV4 474 aaPredicted RBP7.22□□□□□ -1.25
UBR4-212ENST00000475973 SUFUQ9UMX1 484 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 SHOC2Q9UQ13 582 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 USH1CQ9Y6N9 552 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 CNTNAP2Q9UHC6 1331 aa7.22□□□□□ -1.25
UBR4-212ENST00000475973 IGKV6D-21A0A0A0MT36 114 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 WDR64B1ANS9 1081 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 H0YCG3 227 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 NFIBO00712 420 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 SLC16A4O15374 487 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 THAP12O43422 761 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CHMP2AO43633 222 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 EXTL3O43909 919 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 FAM189A1O60320 539 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 ATP9AO75110 1047 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBR4-212ENST00000475973 ENDOD1O94919 500 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 LSM8O95777 96 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 SNAI1O95863 264 aaPredicted RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 WEE2P0C1S8 567 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 TPBGLP0DKB5 382 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 DLATP10515 647 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 RALAP11233 206 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 FGFR1P11362 822 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 ATF2P15336 505 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 RAG1P15918 1043 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 GM2AP17900 193 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CALB2P22676 271 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 ETV4P43268 484 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 SLCO1A2P46721 670 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 ACLYP53396 1101 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 PEX3P56589 373 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 TLE2Q04725 743 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 SLC18A2Q05940 514 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 NFX1Q12986 1120 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 NCOA4Q13772 614 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 PGM5Q15124 567 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CCDC38Q502W7 563 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 NSMFQ6X4W1 530 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 BZW1Q7L1Q6 419 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 POLNQ7Z5Q5 900 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CHSY1Q86X52 802 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms