RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 SLITRK1Q96PX8 696 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 CINPQ9BW66 212 aaPredicted RBP18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 WDCPQ9H6R7 721 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 VPS9D1Q9Y2B5 631 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 SNX13Q9Y5W8 968 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 SLC37A4O43826 429 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 HIST2H2ACQ16777 129 aaPredicted RBP18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 HIST2H2AA3Q6FI13 130 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 CCDC103Q8IW40 242 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 RGS5O15539 181 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 SKIV2LQ15477 1246 aaKnown RBP18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 CACHD1Q5VU97 1274 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 WDR93Q6P2C0 686 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 GPR141Q7Z602 305 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 C3orf20Q8ND61 904 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 L2HGDHQ9H9P8 463 aa18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 RUVBL2Q9Y230 463 aaKnown RBP18.38■□□□□ 0.53
LPCAT1-202ENST00000475622 MLNP12872 115 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 GEMP55040 296 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 ORC1Q13415 861 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 MRNIPQ6NTE8 343 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 FAM117BQ6P1L5 589 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 NOTUMQ6P988 496 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 C10orf88Q9H8K7 445 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 ZSCAN32Q9NX65 697 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 SOX13Q9UN79 622 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 MSH4O15457 936 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 DLGAP3O95886 979 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 ZCCHC18P0CG32 403 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 GRB10Q13322 594 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 MAPRE1Q15691 268 aaKnown RBP18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 AMHR2Q16671 573 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 ZNF34Q8IZ26 560 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 SH3GL2Q99962 352 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 RHBDL2Q9NX52 303 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 DOLKQ9UPQ8 538 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 CD44P16070 742 aaKnown RBP18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 CENPAP49450 140 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 UGT3A1Q6NUS8 523 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 SCUBE1Q8IWY4 988 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 DDHD1Q8NEL9 900 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 FAM151AQ8WW52 585 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 TMBIM4Q9HC24 238 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 RNF112Q9ULX5 631 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 AP4S1Q9Y587 144 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 STRNO43815 780 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 RARGP13631 454 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 CYP2B6P20813 491 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 RGS2P41220 211 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 SCTRP47872 440 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 NUP107P57740 925 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 TTLL9Q3SXZ7 439 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 UNC45BQ8IWX7 931 aa18.37■□□□□ 0.53
LPCAT1-202ENST00000475622 PNPLA4P41247 253 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 GLRBP48167 497 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 TP53BP2Q13625 1128 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 OTOAQ7RTW8 1153 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 CCDC33Q8N5R6 958 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 RASSF9O75901 435 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 ALOX15P16050 662 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 SERPINB8P50452 374 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 FAR2Q96K12 515 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 OSBPL10Q9BXB5 764 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 DPP3Q9NY33 737 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 SDR42E2A6NKP2 422 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 CHRNB3Q05901 458 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 GALNTL6Q49A17 601 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 SLC44A4Q53GD3 710 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 BNC2Q6ZN30 1099 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 LUZP2Q86TE4 346 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 CBWD2Q8IUF1 395 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 DDI1Q8WTU0 396 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 MTERF3Q96E29 417 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 ZNF333Q96JL9 665 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 FRMD8P1Q9BZ68 369 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 IL25Q9H293 177 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 PSMC3P17980 439 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 NME5P56597 212 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 CHMP1BQ7LBR1 199 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 ABI2Q9NYB9 513 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 WHRNQ9P202 907 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 NCF1BA6NI72 391 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 NCF1CA8MVU1 366 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 NCF1P14598 390 aaPredicted RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 MUTP22033 750 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 CASP4P49662 377 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 AQP5P55064 265 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 OTUD4Q01804 1114 aaKnown RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 TFDP3Q5H9I0 405 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 CCNJLQ8IV13 435 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 JADE3Q92613 823 aa18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 SMAD5Q99717 465 aaKnown RBP18.36■□□□□ 0.53
LPCAT1-202ENST00000475622 C17orf75Q9HAS0 396 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms