RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ZDHHC17Q8IUH5 632 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 GPR65Q8IYL9 337 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 UBR7Q8N806 425 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 COLGALT1Q8NBJ5 622 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 RBBP8NLQ8NC74 664 aaPredicted RBP7.44□□□□□ -1.22
SHQ1-207ENST00000475558 KREMEN2Q8NCW0 462 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 GSTCDQ8NEC7 633 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 VN1R2Q8NFZ6 395 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 EPS8L1Q8TE68 723 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 STK32AQ8WU08 396 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 SECISBP2LQ93073 1101 aaKnown RBP7.44□□□□□ -1.22
SHQ1-207ENST00000475558 PPP1R13BQ96KQ4 1090 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
SHQ1-207ENST00000475558 ACBD6Q9BR61 282 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 SYT11Q9BT88 431 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 NGRNQ9NPE2 291 aaKnown RBP7.44□□□□□ -1.22
SHQ1-207ENST00000475558 TRMT1Q9NXH9 659 aaKnown RBP7.44□□□□□ -1.22
SHQ1-207ENST00000475558 KLK14Q9P0G3 267 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 UVRAGQ9P2Y5 699 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 RNF14Q9UBS8 474 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 HESX1Q9UBX0 185 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 NOCTQ9UK39 431 aaKnown RBP7.44□□□□□ -1.22
SHQ1-207ENST00000475558 SORCS3Q9UPU3 1222 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 SSX2IPQ9Y2D8 614 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 JRKLQ9Y4A0 524 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 HES2Q9Y543 173 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 PLXNA3P51805 1871 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 PTPRJQ12913 1337 aa7.44□□□□□ -1.22
SHQ1-207ENST00000475558 FNDC1Q4ZHG4 1894 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 PRR23AA6NEV1 266 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 A8MXQ7 604 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 DDX3XO00571 662 aaKnown RBP eCLIP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CYB561D2O14569 222 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 PTGESO14684 152 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GABRDO14764 452 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 THAP12O43422 761 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 TADA2AO75478 443 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 B3GAT3O94766 335 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 PDGFBP01127 241 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CYP1A1P04798 512 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 ODC1P11926 461 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 IBSPP21815 317 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CDH5P33151 784 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 MLH1P40692 756 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 SLC1A1P43005 524 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 ACADSBP45954 432 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 ALDH7A1P49419 539 aaKnown RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 AARSP49588 968 aaKnown RBP eCLIP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GNG11P61952 73 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 RBM10P98175 930 aaKnown RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 KRT17Q04695 432 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 ITIH3Q06033 890 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GFPT1Q06210 699 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GOLGA8FQ08AF8 430 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GOLGA8DPQ0D2H9 430 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 ARHGAP17Q68EM7 881 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CES5AQ6NT32 575 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 SYCE2Q6PIF2 218 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 LCLAT1Q6UWP7 414 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 TOGARAM2Q6ZUX3 1019 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 SLC47A2Q86VL8 602 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 PHF13Q86YI8 300 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GLYCTKQ8IVS8 523 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 RNF169Q8NCN4 708 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 OR6B3Q8NGW1 331 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 DDX1Q92499 740 aaKnown RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CASP10Q92851 521 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 SENP8Q96LD8 212 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 HSFY1Q96LI6 401 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 NECTIN4Q96NY8 510 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 TCF25Q9BQ70 676 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 AVENQ9NQS1 362 aaPredicted RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 SEPT11Q9NVA2 429 aaKnown RBP7.43□□□□□ -1.22
SHQ1-207ENST00000475558 PARVAQ9NVD7 372 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 GTF3C4Q9UKN8 822 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CDH9Q9ULB4 789 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 MAFFQ9ULX9 164 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 FAN1Q9Y2M0 1017 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 SCINQ9Y6U3 715 aa7.43□□□□□ -1.22
SHQ1-207ENST00000475558 CTAGE9A4FU28 777 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 H7C4K7 107 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 M0QZQ0 153 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MEFVO15553 781 aaPredicted RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MGEA5O60502 916 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MTA2O94776 668 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 OAZ2O95190 189 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 POMCP01189 267 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 PLEKP08567 350 aaPredicted RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 UNGP13051 313 aaPredicted RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CD19P15391 556 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CD58P19256 250 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 PPM1AP35813 382 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MTHFRP42898 656 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 NOP2P46087 812 aaKnown RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ID4P47928 161 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 SCNN1GP51170 649 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CLCN5P51795 746 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 RAD23BP54727 409 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 GALCP54803 685 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms