RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ADAM28Q9UKQ2 775 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 TTC7AQ9ULT0 858 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-210ENST00000475329 USTQ9Y2C2 406 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 FAN1Q9Y2M0 1017 aa14.46□□□□□ -0.09
TRAF4-210ENST00000475329 BRCA2P51587 3418 aa14.46□□□□□ -0.1
TRAF4-210ENST00000475329 UPP2O95045 317 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 AMHP03971 560 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 ALDH2P05091 517 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 RFC1P35251 1148 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-210ENST00000475329 SCNN1AP37088 669 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 SLC11A1P49279 550 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 PEX5P50542 639 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 SLC6A3Q01959 620 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
TRAF4-210ENST00000475329 NAA30Q147X3 362 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-210ENST00000475329 MFSD5Q6N075 450 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 FAM171BQ6P995 826 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 OLFML1Q6UWY5 402 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 CLEC20AQ6ZU45 233 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 RHOT1Q8IXI2 618 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 TSC1Q92574 1164 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 SMARCD1Q96GM5 515 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 RNPC3Q96LT9 517 aaKnown RBP14.45□□□□□ -0.1
TRAF4-210ENST00000475329 NAP1L3Q99457 506 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-210ENST00000475329 PKMYT1Q99640 499 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 PLVAPQ9BX97 442 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 MARCH5Q9NX47 278 aa14.45□□□□□ -0.1
TRAF4-210ENST00000475329 SF3B1O75533 1304 aaKnown RBP eCLIP14.44□□□□□ -0.13e-6■■■■□ 20.7
TRAF4-210ENST00000475329 PAPSS1O43252 624 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-210ENST00000475329 AP1G2O75843 785 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 GABBR2O75899 941 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 DGKIO75912 1065 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 OAZ2O95190 189 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 LCP1P13796 627 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 CSF2RAP15509 400 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 GPD1P21695 349 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 ITGB8P26012 769 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 SSR1P43307 286 aaKnown RBP14.44□□□□□ -0.1
TRAF4-210ENST00000475329 BCAR1P56945 870 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 ZNF211Q13398 564 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-210ENST00000475329 ACAP1Q15027 740 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 CCDC70Q6NSX1 233 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 CC2D1AQ6P1N0 951 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-210ENST00000475329 UBE2Q1Q7Z7E8 422 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 PIGZQ86VD9 579 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 MMGT1Q8N4V1 131 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 EMC1Q8N766 993 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 NOA1Q8NC60 698 aaKnown RBP14.44□□□□□ -0.1
TRAF4-210ENST00000475329 OR10T2Q8NGX3 314 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 KCTD13Q8WZ19 329 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 HCSTQ9UBK5 93 aa14.44□□□□□ -0.1
TRAF4-210ENST00000475329 C2CD4BA6NLJ0 364 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 DPYSL4O14531 572 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 BAIAP3O94812 1187 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 GALTP07902 379 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 DESP17661 470 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 ZNF143P52747 638 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 MAP3K7CLP57077 242 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 TAS2R40P59535 323 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 RNASE9P60153 205 aaKnown RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 WDR5P61964 334 aaKnown RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 ADIGQ0VDE8 80 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 LRRC38Q5VT99 294 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 FAM171A1Q5VUB5 890 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 DAB2IPQ5VWQ8 1189 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 FUT10Q6P4F1 479 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 C4orf50Q6ZRC1 276 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 SLC26A9Q7LBE3 791 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 SCUBE3Q8IX30 993 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 KATNAL2Q8IYT4 538 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 DCP1BQ8IZD4 617 aaKnown RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 SIX6OS1Q8N1H7 587 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 GPR161Q8N6U8 529 aaKnown RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 SMOQ99835 787 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 CNPY3Q9BT09 278 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 LRRC4Q9HBW1 653 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 IL23AQ9NPF7 189 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 RBM12Q9NTZ6 932 aaKnown RBP14.43□□□□□ -0.1
TRAF4-210ENST00000475329 ASNSD1Q9NWL6 643 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 TMEM59LQ9UK28 342 aa14.43□□□□□ -0.1
TRAF4-210ENST00000475329 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 F8VP50 259 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 RNF8O76064 485 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 BEST1O76090 585 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 FBXO21O94952 628 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 FGGP02679 453 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 EN2P19622 333 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-210ENST00000475329 FGFR3P22607 806 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 GJC1P36383 396 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 HADHQ16836 314 aaKnown RBP14.42□□□□□ -0.1
TRAF4-210ENST00000475329 LONRF2Q1L5Z9 754 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 VARS2Q5ST30 1063 aaKnown RBP14.42□□□□□ -0.1
TRAF4-210ENST00000475329 ZNF280DQ6N043 979 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 ARCQ7LC44 396 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 SPATA2LQ8IUW3 424 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-210ENST00000475329 RXFP2Q8WXD0 754 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 TOP1MTQ969P6 601 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 TMEM209Q96SK2 561 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms