RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 MED10Q9BTT4 135 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 ASNSD1Q9NWL6 643 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 TMEM161AQ9NX61 479 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 DDX56Q9NY93 547 aaKnown RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 STIM2Q9P246 746 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 CACNG4Q9UBN1 327 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 TJP2Q9UDY2 1190 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 DSEQ9UL01 958 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 CDH9Q9ULB4 789 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 PCDHB7Q9Y5E2 793 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 LTBP2Q14767 1821 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 TMEM265A0A087WTH1 108 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 ENPP3O14638 875 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 XPO1O14980 1071 aaKnown RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 SART1O43290 800 aaKnown RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 HCRTO43612 131 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 NBNO60934 754 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 HEXIM1O94992 359 aaKnown RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 GPD1P21695 349 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 PCSK1P29120 753 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 CHRNA3P32297 505 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 GJC1P36383 396 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 SLC7A5Q01650 507 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 SLC6A3Q01959 620 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 OGDHQ02218 1023 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 ZNF252P-AS1Q0IIN9 211 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 TIGD5Q53EQ6 642 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 ZFYVE27Q5T4F4 411 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 MFSD5Q6N075 450 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 AADACL2Q6P093 401 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 CCNI2Q6ZMN8 369 aaPredicted RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 FAM183BPQ6ZVS7 135 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 RCOR2Q8IZ40 523 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 ABI1Q8IZP0 508 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 THEM5Q8N1Q8 247 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 C3orf58Q8NDZ4 430 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 DBF4BQ8NFT6 615 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 JOSD2Q8TAC2 188 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 LINC01599Q8WXQ3 324 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 RBM41Q96IZ5 413 aaKnown RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 HSFY1Q96LI6 401 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 LPIN3Q9BQK8 851 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 SYT15Q9BQS2 421 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 DUSP16Q9BY84 665 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 DDX47Q9H0S4 455 aaKnown RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 DMGDHQ9UI17 866 aaKnown RBP10.74□□□□□ -0.69
PCCB-213ENST00000475214 LRFN2Q9ULH4 789 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 COL6A3P12111 3177 aa10.74□□□□□ -0.69
PCCB-213ENST00000475214 F8VP50 259 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 M0QZQ0 153 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 PIK3R2O00459 728 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 FSCN2O14926 492 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 HOXA2O43364 376 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 RAD51CO43502 376 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 PHF2O75151 1096 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 ATP2C2O75185 946 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 KRT1P04264 644 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 CYP11A1P05108 521 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 KRT7P08729 469 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 TYMPP19971 482 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 ACAT1P24752 427 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 TNFRSF8P28908 595 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 SCNN1AP37088 669 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 PLA2G4AP47712 749 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 ZNF143P52747 638 aaPredicted RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 COPS2P61201 443 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 PLCB3Q01970 1234 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 GUCY2DQ02846 1103 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 RNASELQ05823 741 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 DHX34Q14147 1143 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 SMC1AQ14683 1233 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 MDH1BQ5I0G3 518 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 POLNQ7Z5Q5 900 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 EMC1Q8N766 993 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 MAGOHBQ96A72 148 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 SUSD3Q96L08 255 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 ACBD6Q9BR61 282 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 PAAF1Q9BRP4 392 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 CNPY3Q9BT09 278 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 HIPK3Q9H422 1215 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 EPB41L5Q9HCM4 733 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 GDF3Q9NR23 364 aa10.73□□□□□ -0.69
PCCB-213ENST00000475214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.73□□□□□ -0.69
PCCB-213ENST00000475214 TIMM13Q9Y5L4 95 aaPredicted RBP10.73□□□□□ -0.69
PCCB-213ENST00000475214 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.72□□□□□ -0.69
PCCB-213ENST00000475214 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.72□□□□□ -0.69
PCCB-213ENST00000475214 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
PCCB-213ENST00000475214 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
PCCB-213ENST00000475214 TULP2O00295 520 aa10.72□□□□□ -0.69
PCCB-213ENST00000475214 PAPSS1O43252 624 aaPredicted RBP10.72□□□□□ -0.69
PCCB-213ENST00000475214 TRAPPC3O43617 180 aa10.72□□□□□ -0.69
PCCB-213ENST00000475214 ZMYND10O75800 440 aa10.72□□□□□ -0.69
PCCB-213ENST00000475214 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
PCCB-213ENST00000475214 FAM200BP0CF97 657 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms