RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
LSS-208ENST00000474319 HACE1Q8IYU2 909 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 ALLCQ8N6M5 410 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 POU5F2Q8N7G0 328 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 C10orf82Q8WW14 230 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 DNAJC9Q8WXX5 260 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 ZBED3Q96IU2 234 aaPredicted RBP11.24□□□□□ -0.61
LSS-208ENST00000474319 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 VPS33BQ9H267 617 aa11.24□□□□□ -0.61
LSS-208ENST00000474319 E5RJQ4 531 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 INO80B-WBP1J3KQ70 363 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 TBC1D12O60347 775 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 DCTN3O75935 186 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 C4BPAP04003 597 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 KRT3P12035 628 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 ACO1P21399 889 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 VCPP55072 806 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 TMPRSS15P98073 1019 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 CAV1Q03135 178 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 RIPK1Q13546 671 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 PDK4Q16654 411 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 C15orf59Q2T9L4 293 aaPredicted RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 MROH9Q5TGP6 573 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 RINLQ6ZS11 566 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 KATNAL2Q8IYT4 538 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 BBOF1Q8ND07 529 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 PPP1R14CQ8TAE6 165 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 MMP19Q99542 508 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 CADM1Q9BY67 442 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 MAGEB5Q9BZ81 275 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 INO80BQ9C086 356 aaPredicted RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 CYP4F11Q9HBI6 524 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 PSTPIP1O43586 416 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 APRTP07741 180 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 JAK3P52333 1124 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 ARL4CP56559 192 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 BPIFB4P59827 614 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 PPP2R5DQ14738 602 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 TFDP3Q5H9I0 405 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 MAGEC3Q8TD91 643 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 CPT1BQ92523 772 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 TRIM55Q9BYV6 548 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 NGRNQ9NPE2 291 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 PCMTD2Q9NV79 361 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 SNCAIPQ9Y6H5 919 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 CCDC78A2IDD5 438 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 ARHGAP42A6NI28 874 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 CYP1A1P04798 512 aaPredicted RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 PSAPP07602 524 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 AMPD1P23109 780 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 EPHB1P54762 984 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 MYBPC2Q14324 1141 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 ZNF568Q3ZCX4 644 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 RNASEH2BQ5TBB1 312 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 ANO7Q6IWH7 933 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 RCOR2Q8IZ40 523 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 KIAA0319LQ8IZA0 1049 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 PDIK1LQ8N165 341 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 FAF2Q96CS3 445 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 RBM41Q96IZ5 413 aaKnown RBP11.23□□□□□ -0.61
LSS-208ENST00000474319 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 NMUR2Q9GZQ4 415 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 ZFATQ9P243 1243 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 HMGXB4Q9UGU5 601 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 COQ4Q9Y3A0 265 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 SCINQ9Y6U3 715 aa11.23□□□□□ -0.61
LSS-208ENST00000474319 hCG_1818297A0A087WSY0 165 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
LSS-208ENST00000474319 B2RBV5 119 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 TRIM49D1C9J1S8 452 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
LSS-208ENST00000474319 TOM1L1O75674 476 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 AP1G2O75843 785 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 RGS20O76081 388 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 TMEM191BP0C7N4 346 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 MOGSQ13724 837 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 SNX30Q5VWJ9 437 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 CDHR3Q6ZTQ4 885 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 LMNTD2Q8IXW0 634 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 TMEM192Q8IY95 271 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 UNC5BQ8IZJ1 945 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 THTPAQ9BU02 230 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 NMRK1Q9NWW6 199 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 RABGEF1Q9UJ41 708 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 TMEM191CA6NGB0 347 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 B4GALT5O43286 388 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 DGAT1O75907 488 aa11.22□□□□□ -0.61
LSS-208ENST00000474319 ABCG1P45844 678 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms