RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 LEFTY2O00292 366 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 MATR3P43243 847 aaKnown RBP eCLIP17.42■□□□□ 0.38
HPS4-210ENST00000473782 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 C19orf57Q0VDD7 668 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 ST3GAL1Q11201 340 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 CAMK2BQ13554 666 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 BYSLQ13895 437 aaKnown RBP17.42■□□□□ 0.38
HPS4-210ENST00000473782 DHCR24Q15392 516 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 EOGTQ5NDL2 527 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 RHBDF2Q6PJF5 856 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 METTL23Q86XA0 190 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 FAM212AQ96EL1 285 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 PNKPQ96T60 521 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 PCOLCE2Q9UKZ9 415 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 CEP192Q8TEP8 1941 aa17.42■□□□□ 0.38
HPS4-210ENST00000473782 MYO18AQ92614 2054 aaKnown RBP17.41■□□□□ 0.38
HPS4-210ENST00000473782 A0A1W2PQD8 194 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 PIGRP01833 764 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 PLA2G2AP14555 144 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 HDCP19113 662 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 TAF6P49848 677 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 CYP4F3Q08477 520 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 TMEM132DQ14C87 1099 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 FILIP1Q7Z7B0 1213 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 CD302Q8IX05 232 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 TIPINQ9BVW5 301 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 CALCOCO1Q9P1Z2 691 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 DERAQ9Y315 318 aa17.41■□□□□ 0.38
HPS4-210ENST00000473782 NPHP3-ACAD11A0A0J9YXS1 232 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 SYPP08247 313 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 EIF2DP41214 584 aaKnown RBP17.4■□□□□ 0.38
HPS4-210ENST00000473782 KYAT1Q16773 422 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 MIB1Q86YT6 1006 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 SCUBE3Q8IX30 993 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 PGBD3Q8N328 593 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 TRIML1Q8N9V2 468 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 BAHD1Q8TBE0 780 aaPredicted RBP17.4■□□□□ 0.38
HPS4-210ENST00000473782 SPATA18Q8TC71 538 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 ZNF419Q96HQ0 510 aaPredicted RBP17.4■□□□□ 0.38
HPS4-210ENST00000473782 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
HPS4-210ENST00000473782 RNF38Q9H0F5 515 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 ABCB6Q9NP58 842 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 CD93Q9NPY3 652 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 PCDHB9Q9Y5E1 797 aa17.4■□□□□ 0.38
HPS4-210ENST00000473782 A0A1W2PQF6 199 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 TRABD2BA6NFA1 517 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 MYMKA6NI61 221 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 SCAMP3O14828 347 aaKnown RBP17.39■□□□□ 0.37
HPS4-210ENST00000473782 HCRTO43612 131 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
HPS4-210ENST00000473782 TNFRSF4P43489 277 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 LIG4P49917 911 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 SMTNP53814 917 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 RPL10AP62906 217 aaKnown RBP17.39■□□□□ 0.37
HPS4-210ENST00000473782 ATP2C1P98194 919 aaPredicted RBP17.39■□□□□ 0.37
HPS4-210ENST00000473782 NFE2Q16621 373 aaPredicted RBP17.39■□□□□ 0.37
HPS4-210ENST00000473782 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 SLC36A4Q6YBV0 504 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 RABEPKQ7Z6M1 372 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 OSTM1Q86WC4 334 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 PDCL2Q8N4E4 241 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 SLC39A7Q92504 469 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 BICD1Q96G01 975 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 PNMA5Q96PV4 448 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 DPP3Q9NY33 737 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 GTF3C4Q9UKN8 822 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 APOBEC2Q9Y235 224 aaKnown RBP17.39■□□□□ 0.37
HPS4-210ENST00000473782 C2CD2Q9Y426 696 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 MYOFQ9NZM1 2061 aa17.39■□□□□ 0.37
HPS4-210ENST00000473782 TK2O00142 265 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 APODP05090 189 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 GRIA2P42262 883 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 ACOT2P49753 483 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 SLC12A3P55017 1021 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 USP46P62068 366 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 KDSRQ06136 332 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 GRIK2Q13002 908 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 KCNB1Q14721 858 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 PLEKHG6Q3KR16 790 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 DBX2Q6ZNG2 339 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 SYT2Q8N9I0 419 aaPredicted RBP17.38■□□□□ 0.37
HPS4-210ENST00000473782 HSPA12BQ96MM6 686 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 ACBD6Q9BR61 282 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 ASB7Q9H672 318 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 IL21RQ9HBE5 538 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 ARHGEF4Q9NR80 690 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 L1RE1Q9UN81 338 aa17.38■□□□□ 0.37
HPS4-210ENST00000473782 TISP43B9A030 160 aa17.37■□□□□ 0.37
HPS4-210ENST00000473782 OLFM2O95897 454 aa17.37■□□□□ 0.37
HPS4-210ENST00000473782 ATXN1LP0C7T5 689 aaKnown RBP17.37■□□□□ 0.37
HPS4-210ENST00000473782 MAOBP27338 520 aa17.37■□□□□ 0.37
HPS4-210ENST00000473782 TOB1P50616 345 aaPredicted RBP17.37■□□□□ 0.37
HPS4-210ENST00000473782 WNT7BP56706 349 aa17.37■□□□□ 0.37
HPS4-210ENST00000473782 SLC7A9P82251 487 aa17.37■□□□□ 0.37
HPS4-210ENST00000473782 TSPY1Q01534 308 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms