RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 C8orf33Q9H7E9 229 aaPredicted RBP13.48□□□□□ -0.25
C9orf85-204ENST00000473252 RAB20Q9NX57 234 aa13.48□□□□□ -0.25
C9orf85-204ENST00000473252 COQ4Q9Y3A0 265 aa13.48□□□□□ -0.25
C9orf85-204ENST00000473252 ZDBF2Q9HCK1 2354 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 ARNTLO00327 626 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 PMM2O15305 246 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 RTN3O95197 1032 aaPredicted RBP13.47□□□□□ -0.25
C9orf85-204ENST00000473252 TCF3P15923 654 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
C9orf85-204ENST00000473252 WDR44Q5JSH3 913 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 NUP93Q8N1F7 819 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 MAB21L3Q8N8X9 362 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 PDZD8Q8NEN9 1154 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 OVCA2Q8WZ82 227 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
C9orf85-204ENST00000473252 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 IER2Q9BTL4 223 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 NT5C1AQ9BXI3 368 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 B3GNT5Q9BYG0 378 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 NIF3L1Q9GZT8 377 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 SDCBP2Q9H190 292 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 LTB4R2Q9NPC1 389 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 HEBP1Q9NRV9 189 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 TDP1Q9NUW8 608 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 DLGAP2Q9P1A6 1054 aa13.47□□□□□ -0.25
C9orf85-204ENST00000473252 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
C9orf85-204ENST00000473252 PATJQ8NI35 1801 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 NCANO14594 1321 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 TRAV19A0A0A6YYK7 116 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 PPP1R3GB7ZBB8 358 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 F8VP50 259 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 TADA3O75528 432 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 FGFR1OPO95684 399 aaKnown RBP13.46□□□□□ -0.25
C9orf85-204ENST00000473252 GNA14O95837 355 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 USP17L7P0C7H9 530 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 RPS9P46781 194 aaKnown RBP13.46□□□□□ -0.25
C9orf85-204ENST00000473252 RAP1GAPP47736 663 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 CDR1P51861 262 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 NDST1P52848 882 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 CCDC142Q17RM4 750 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 TXNDC8Q6A555 127 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 SPOPLQ6IQ16 392 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 CLDN23Q96B33 292 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 SLITRK1Q96PX8 696 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 CSNK1G1Q9HCP0 422 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 DMAP1Q9NPF5 467 aaPredicted RBP13.46□□□□□ -0.25
C9orf85-204ENST00000473252 IL37Q9NZH6 218 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 KIAA1468Q9P260 1216 aa13.46□□□□□ -0.25
C9orf85-204ENST00000473252 TRIM49BA6NDI0 452 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 FAM170BA6NMN3 283 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 P4HA2O15460 535 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 CILPO75339 1184 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 BMP6P22004 513 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 AMPD2Q01433 879 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 CETN1Q12798 172 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 UBXN2BQ14CS0 331 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 TCERG1LQ5VWI1 586 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 SCARA5Q6ZMJ2 495 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 PAQR9Q6ZVX9 377 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 ACOT1Q86TX2 421 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 FAM35AQ86V20 835 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
C9orf85-204ENST00000473252 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 FAM3CQ92520 227 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
C9orf85-204ENST00000473252 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
C9orf85-204ENST00000473252 MED10Q9BTT4 135 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 MMRN2Q9H8L6 949 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 APOBEC3GQ9HC16 384 aaKnown RBP13.45□□□□□ -0.26
C9orf85-204ENST00000473252 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
C9orf85-204ENST00000473252 FAM92AA1XBS5 289 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 ZNF840PA6NDX5 716 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 CLDN5O00501 218 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 PRAMEF12O95522 483 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 HDCP19113 662 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 YWHAQP27348 245 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 MARSP56192 900 aaKnown RBP13.44□□□□□ -0.26
C9orf85-204ENST00000473252 YWHAEP62258 255 aaKnown RBP13.44□□□□□ -0.26
C9orf85-204ENST00000473252 PAK1Q13153 545 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
C9orf85-204ENST00000473252 SNX30Q5VWJ9 437 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 CC2D1AQ6P1N0 951 aaPredicted RBP13.44□□□□□ -0.26
C9orf85-204ENST00000473252 C1orf210Q8IVY1 113 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 STKLD1Q8NE28 680 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 SLC35C1Q96A29 364 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 CYFIP2Q96F07 1278 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 EEF2KMTQ96G04 330 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 LRRC3BQ96PB8 259 aa13.44□□□□□ -0.26
C9orf85-204ENST00000473252 DUSP9Q99956 384 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms