RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SLC5A3P53794 718 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 GBE1Q04446 702 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 CUL4BQ13620 913 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 TARBP2Q15633 366 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 FSCN1Q16658 493 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 KBTBD12Q3ZCT8 623 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 DUSP28Q4G0W2 176 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 FYB2Q5VWT5 728 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 SLC2A7Q6PXP3 512 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 KLHL24Q6TFL4 600 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ARMC8Q8IUR7 673 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 KIAA2013Q8IYS2 634 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 LRRC43Q8N309 656 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 OTUD7AQ8TE49 926 aaPredicted RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 TBC1D22AQ8WUA7 517 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 DEPDC1BQ8WUY9 529 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ANKS1AQ92625 1134 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 CUL5Q93034 780 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 VPS33AQ96AX1 596 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ZNF653Q96CK0 615 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 LZTS2Q9BRK4 669 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 SLC39A3Q9BRY0 314 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 THUMPD3Q9BV44 507 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 KRT23Q9C075 422 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 SLC7A5P2Q9GIP4 190 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 NDST4Q9H3R1 872 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 C19orf44Q9H6X5 657 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 MLXIPQ9HAP2 919 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 SP110Q9HB58 689 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 SNTG1Q9NSN8 517 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 DECR2Q9NUI1 292 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 EXOC1Q9NV70 894 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ACTR3BQ9P1U1 418 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 TRPC5Q9UL62 973 aaPredicted RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 TRAF3IP3Q9Y228 551 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 SLC5A6Q9Y289 635 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 MAN2B2Q9Y2E5 1009 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 CYP46A1Q9Y6A2 500 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 XRN1Q8IZH2 1706 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 NCOA3Q9Y6Q9 1424 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 TMEM131LA2VDJ0 1609 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 GPR75-ASB3A0A0A6YYF3 556 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 CCDC78A2IDD5 438 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 ZNF862O60290 1169 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 KINO60870 393 aaKnown RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 MTRF1O75570 445 aaKnown RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 KITP10721 976 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 PDHBP11177 359 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 MYL4P12829 197 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 KRT2P35908 639 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 SKIV2L2P42285 1042 aaKnown RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 MAP2K6P52564 334 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 DLG4P78352 724 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 CCNA1P78396 465 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 YWHAHQ04917 246 aaPredicted RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 SLC20A2Q08357 652 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 EPS8Q12929 822 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 CBX3Q13185 183 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 FGL2Q14314 439 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 SYCP1Q15431 976 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 TBCEQ15813 527 aaPredicted RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 CT83Q5H943 113 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 HP1BP3Q5SSJ5 553 aaPredicted RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 TMEM132EQ6IEE7 984 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 MTFR2Q6P444 385 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 OGFOD3Q6PK18 319 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 SLC30A9Q6PML9 568 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 KLHL17Q6TDP4 642 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 DYMQ7RTS9 669 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 SPRED2Q7Z698 418 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 PXKQ7Z7A4 578 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 PPIL6Q8IXY8 311 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 DCLK2Q8N568 766 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 FAM216AQ8WUB2 273 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 THAP4Q8WY91 577 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 RGMAQ96B86 450 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 RBM14Q96PK6 669 aaKnown RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 FTOQ9C0B1 505 aaKnown RBP eCLIP6.4□□□□□ -1.38
RTF1-203ENST00000473214 PCIF1Q9H4Z3 704 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 INCENPQ9NQS7 918 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 TM7SF3Q9NS93 570 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 KRT82Q9NSB4 513 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 TCP11L1Q9NUJ3 509 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 AATFQ9NY61 560 aaKnown RBP eCLIP6.4□□□□□ -1.38
RTF1-203ENST00000473214 TAB2Q9NYJ8 693 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 IGSF9Q9P2J2 1179 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 CACNG4Q9UBN1 327 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 EXTL2Q9UBQ6 330 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 MORF4L1Q9UBU8 362 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 PTBP2Q9UKA9 531 aaKnown RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 SCAF8Q9UPN6 1271 aaKnown RBP6.4□□□□□ -1.38
RTF1-203ENST00000473214 CAMK2AQ9UQM7 478 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 PIAS3Q9Y6X2 628 aa6.4□□□□□ -1.38
RTF1-203ENST00000473214 MYOM2P54296 1465 aa6.4□□□□□ -1.39
RTF1-203ENST00000473214 RALGAPBQ86X10 1494 aa6.4□□□□□ -1.39
RTF1-203ENST00000473214 NRXN3Q9Y4C0 1643 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms