RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SAAL1Q96ER3 474 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 B3GALT6Q96L58 329 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 FAM126AQ9BYI3 521 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 CCDC113Q9H0I3 377 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 RSAD1Q9HA92 442 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 SEMA4GQ9NTN9 838 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 AGPAT5Q9NUQ2 364 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 DMAC2Q9NW81 257 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 IMPACTQ9P2X3 320 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ARMCX3Q9UH62 379 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ANGPTL2Q9UKU9 493 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 SSX2IPQ9Y2D8 614 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ZFP37Q9Y6Q3 630 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 SPAG17Q6Q759 2223 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ASXL3Q9C0F0 2248 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 SMG1Q96Q15 3661 aaKnown RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 RALGAPA1Q6GYQ0 2036 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 CNTNAP2Q9UHC6 1331 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 SCN1AP35498 2009 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 A0A1W2PQC6 194 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GOLGA8IPA6NC78 632 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GOLGA8JA6NMD2 632 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 INO80B-WBP1J3KQ70 363 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 K7ERI5 159 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 ASAP2O43150 1006 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 FZD6O60353 706 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 ADRB2P07550 413 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 TPM1P09493 284 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 TRIM49P0CI25 452 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 TRIM49CP0CI26 452 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 KRT13P13646 458 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 RPL17P18621 184 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GARTP22102 1010 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 HOXA11P31270 313 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GPC1P35052 558 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 PSMC2P35998 433 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 OR1G1P47890 313 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 KLK7P49862 253 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 SNRPFP62306 86 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 PFKPQ01813 784 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 MBTD1Q05BQ5 628 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 PPP2R3AQ06190 1150 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GOLGA8FQ08AF8 430 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 DMWDQ09019 674 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GOLGA8DPQ0D2H9 430 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 BFSP1Q12934 665 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 TRIM14Q14142 442 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 MYBPC2Q14324 1141 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 NOLC1Q14978 699 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 SYCP1Q15431 976 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 CSRP2Q16527 193 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 MAPK6Q16659 721 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 ALKBH2Q6NS38 261 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 TMEM214Q6NUQ4 689 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 PRR23CQ6ZRP0 262 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 MTSS1LQ765P7 747 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF410Q86VK4 478 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GPR65Q8IYL9 337 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 XXYLT1Q8NBI6 393 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 SMG8Q8ND04 991 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 ZSWIM2Q8NEG5 633 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 ITFG1Q8TB96 612 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GIPC2Q8TF65 315 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 FGF13Q92913 245 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 KCNN1Q92952 543 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 KXD1Q9BQD3 176 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 NTPCRQ9BSD7 190 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 TARS2Q9BW92 718 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GPR62Q9BZJ7 368 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 INO80BQ9C086 356 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 GRIP2Q9C0E4 1043 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 CHRDQ9H2X0 955 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 KCNF1Q9H3M0 494 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 NDST4Q9H3R1 872 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 MMRN2Q9H8L6 949 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 METTL14Q9HCE5 456 aaKnown RBP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 FNIP2Q9P278 1114 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 KANSL3Q9P2N6 904 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 FBXW11Q9UKB1 542 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 USP20Q9Y2K6 914 aa6.85□□□□□ -1.31
HDAC1-205ENST00000472928 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDAC1-205ENST00000472928 BPTFQ12830 3046 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 APC2O95996 2303 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ACACAQ13085 2346 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MYH10P35580 1976 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 LRRC10BA6NIK2 292 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 TM4SF5O14894 197 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 SPINT1O43278 529 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 B4GALT5O43286 388 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 NDUFB5O43674 189 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MFAP3LO75121 409 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 AFPP02771 609 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 GYPCP04921 128 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PROS1P07225 676 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms