RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 ARCQ7LC44 396 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 POLNQ7Z5Q5 900 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 EXD1Q8NHP7 514 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 KCTD13Q8WZ19 329 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 CNPY3Q9BT09 278 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 LRRC4Q9HBW1 653 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 KRT82Q9NSB4 513 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 TMEM59LQ9UK28 342 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 ABHD14A-ACY1A0A1B0GW23 586 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 CARNS1A5YM72 827 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 SART1O43290 800 aaKnown RBP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 ATP2C2O75185 946 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 FBXO21O94952 628 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 ZRANB2O95218 330 aaKnown RBP eCLIP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 GJB6O95452 261 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 ZNF143P52747 638 aaPredicted RBP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 SMC1AQ14683 1233 aaKnown RBP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 OLFML1Q6UWY5 402 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 FAM35AQ86V20 835 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 CCDC50Q8IVM0 306 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 SIX6OS1Q8N1H7 587 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 CCDC26Q8TAB7 109 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 PCED1BQ96HM7 432 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 RUNDC3BQ96NL0 473 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 UBXN6Q9BZV1 441 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 TJP2Q9UDY2 1190 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 FAN1Q9Y2M0 1017 aa15.36■□□□□ 0.05
HIF3A-206ENST00000472815 PRG3Q9Y2Y8 225 aaPredicted RBP15.36■□□□□ 0.05
HIF3A-206ENST00000472815 FNDC1Q4ZHG4 1894 aaPredicted RBP15.35■□□□□ 0.05
HIF3A-206ENST00000472815 TBKBP1A7MCY6 615 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 I3L4J1 428 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 AP1G2O75843 785 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 TIMP1P01033 207 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 PDGFRAP16234 1089 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 TKTP29401 623 aaKnown RBP15.35■□□□□ 0.05
HIF3A-206ENST00000472815 SDC4P31431 198 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 MARCKSL1P49006 195 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 BRD3Q15059 726 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 CD300LGQ6UXG3 332 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 SLC26A9Q7LBE3 791 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 MAATS1Q7Z4T9 603 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 PIGZQ86VD9 579 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 RCOR2Q8IZ40 523 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 DCP1BQ8IZD4 617 aaKnown RBP15.35■□□□□ 0.05
HIF3A-206ENST00000472815 TMEM199Q8N511 208 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 OXCT2Q9BYC2 517 aaPredicted RBP15.35■□□□□ 0.05
HIF3A-206ENST00000472815 B3GNT5Q9BYG0 378 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 PARD6BQ9BYG5 372 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 SLITRK6Q9H5Y7 841 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 NRDE2Q9H7Z3 1164 aa15.35■□□□□ 0.05
HIF3A-206ENST00000472815 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.05
HIF3A-206ENST00000472815 MYBPHLA2RUH7 354 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 CCDC151A5D8V7 595 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 C2CD4BA6NLJ0 364 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 F8VP50 259 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 PYGMP11217 842 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 LCP1P13796 627 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 RAG1P15918 1043 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 PCK1P35558 622 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 COPS2P61201 443 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 ZNF252P-AS1Q0IIN9 211 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 LRRC26Q2I0M4 334 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 MAP9Q49MG5 647 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 WDR93Q6P2C0 686 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 FAM171BQ6P995 826 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 CLEC20AQ6ZU45 233 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 SLC13A5Q86YT5 568 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-206ENST00000472815 SCUBE3Q8IX30 993 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 CRIPAKQ8N1N5 446 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 JOSD2Q8TAC2 188 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 LPIN3Q9BQK8 851 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 ANKZF1Q9H8Y5 726 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 PRDM5Q9NQX1 630 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-206ENST00000472815 HOMER3Q9NSC5 361 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 TULP2O00295 520 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 PIK3R2O00459 728 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 DPYSL4O14531 572 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 NRP1O14786 923 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 KIAA0355O15063 1070 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 PAPSS1O43252 624 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-206ENST00000472815 HSF2BPO75031 334 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 OAZ2O95190 189 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 AMHP03971 560 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 ITGB1P05556 798 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 GLI1P08151 1106 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 IGFBP6P24592 240 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-206ENST00000472815 OGDHQ02218 1023 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 NFE2Q16621 373 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-206ENST00000472815 MTERF4Q7Z6M4 381 aaKnown RBP15.34■□□□□ 0.05
HIF3A-206ENST00000472815 EMC1Q8N766 993 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 KRT12Q99456 494 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 AP1M1Q9BXS5 423 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 PNPLA8Q9NP80 782 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms