RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 DUS2Q9NX74 493 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 GTF3C4Q9UKN8 822 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 DSEQ9UL01 958 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 ODF2LQ9ULJ1 636 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 PCDHB5Q9Y5E4 795 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 URB1O60287 2271 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 ANK1P16157 1881 aa10.02□□□□□ -0.8
VCL-204ENST00000472585 UPK3BL1B0FP48 263 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 UPK3BL2E5RIL1 263 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 OPHN1O60890 802 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 ATP2C2O75185 946 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 ALDH1A2O94788 518 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 CFIP05156 583 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 CSH1P0DML2 217 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 CSH2P0DML3 217 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 PAX3P23760 479 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 DDX6P26196 483 aaKnown RBP eCLIP10.02□□□□□ -0.81
VCL-204ENST00000472585 SLC6A11P48066 632 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 USP46P62068 366 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 FAM160A1Q05DH4 1040 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 USP4Q13107 963 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 SEMA3BQ13214 749 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 PDGFRLQ15198 375 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 C2orf27AQ580R0 203 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 LMBRD2Q68DH5 695 aaPredicted RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 ADALQ6DHV7 355 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 ARMCX6Q7L4S7 300 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 METTL23Q86XA0 190 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 DCP1BQ8IZD4 617 aaKnown RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 CCDC33Q8N5R6 958 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 KCTD17Q8N5Z5 321 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 ARL14EPQ8N8R7 260 aaPredicted RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 C1orf127Q8N9H9 656 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 TTC16Q8NEE8 873 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 RLN3Q8WXF3 142 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 MRPS31Q92665 395 aaKnown RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 FNBP1Q96RU3 617 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 KIF9Q9HAQ2 790 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 PARVGQ9HBI0 331 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 TRPC7Q9HCX4 862 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 ZDHHC4Q9NPG8 344 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 MBD1Q9UIS9 605 aaPredicted RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 AGO2Q9UKV8 859 aaKnown RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
VCL-204ENST00000472585 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 TNRC6BQ9UPQ9 1833 aaKnown RBP10.02□□□□□ -0.81
VCL-204ENST00000472585 PTPRDP23468 1912 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 H0YCG3 227 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 TNFRSF10BO14763 440 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 FAM13AO94988 1023 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 CAPNS1P04632 268 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 PLCG1P19174 1290 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 LMO2P25791 158 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 POLR2BP30876 1174 aaKnown RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 SEC13P55735 322 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 GFPT1Q06210 699 aaPredicted RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 SMARCB1Q12824 385 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 NR1H3Q13133 447 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 SLC23A3Q6PIS1 610 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 USP49Q70CQ1 688 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 TMEFF1Q8IYR6 380 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 ADGRG2Q8IZP9 1017 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 MDGA1Q8NFP4 955 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 OLIG1Q8TAK6 271 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 SH3RF2Q8TEC5 729 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 RAD54LQ92698 747 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 TRMT2BQ96GJ1 504 aaKnown RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 CNOT6LQ96LI5 555 aaKnown RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 ZSCAN31Q96LW9 406 aaPredicted RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 BBC3Q96PG8 261 aaPredicted RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 ACBD6Q9BR61 282 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 RNF38Q9H0F5 515 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 ST6GALNAC4Q9H4F1 302 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 FSCN3Q9NQT6 498 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 DDX43Q9NXZ2 648 aaKnown RBP10.01□□□□□ -0.81
VCL-204ENST00000472585 SIX4Q9UIU6 781 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 HCN2Q9UL51 889 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 AGAP1Q9UPQ3 857 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 NME7Q9Y5B8 376 aa10.01□□□□□ -0.81
VCL-204ENST00000472585 PLXNB3Q9ULL4 1909 aa10□□□□□ -0.81
VCL-204ENST00000472585 GABRDO14764 452 aa10□□□□□ -0.81
VCL-204ENST00000472585 SCAMP3O14828 347 aaKnown RBP10□□□□□ -0.81
VCL-204ENST00000472585 USP17L7P0C7H9 530 aa10□□□□□ -0.81
VCL-204ENST00000472585 PTGER3P43115 390 aa10□□□□□ -0.81
VCL-204ENST00000472585 IFNAR2P48551 515 aa10□□□□□ -0.81
VCL-204ENST00000472585 FAM193AP78312 1265 aa10□□□□□ -0.81
VCL-204ENST00000472585 BYSLQ13895 437 aaKnown RBP10□□□□□ -0.81
VCL-204ENST00000472585 CRY1Q16526 586 aa10□□□□□ -0.81
VCL-204ENST00000472585 DUOXA1Q1HG43 343 aa10□□□□□ -0.81
VCL-204ENST00000472585 SOWAHAQ2M3V2 549 aa10□□□□□ -0.81
VCL-204ENST00000472585 RILPL1Q5EBL4 403 aa10□□□□□ -0.81
VCL-204ENST00000472585 INTS6LQ5JSJ4 861 aaKnown RBP10□□□□□ -0.81
VCL-204ENST00000472585 LYSMD4Q5XG99 296 aa10□□□□□ -0.81
VCL-204ENST00000472585 ARL6IP4Q66PJ3 421 aaKnown RBP10□□□□□ -0.81
VCL-204ENST00000472585 MCTP1Q6DN14 999 aa10□□□□□ -0.81
VCL-204ENST00000472585 FAM171BQ6P995 826 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms