RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 FMO1Q01740 532 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 TWF1Q12792 350 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
CCM2-205ENST00000472223 SPA17Q15506 151 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 DDR2Q16832 855 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 CCDC142Q17RM4 750 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 E4F1Q66K89 784 aaPredicted RBP17.8■□□□□ 0.44
CCM2-205ENST00000472223 HGSNATQ68CP4 663 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 DENND1BQ6P3S1 775 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 WDR59Q6PJI9 974 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 EP400NLQ6ZTU2 488 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 TTC30AQ86WT1 665 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 ERICH1Q86X53 443 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 SIX6OS1Q8N1H7 587 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 EFHBQ8N7U6 833 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 STK32AQ8WU08 396 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 PDLIM2Q96JY6 352 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 SPATA17Q96L03 361 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 HSFY1Q96LI6 401 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 RHOBTB2Q9BYZ6 727 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 ZDHHC7Q9NXF8 308 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 ARHGAP20Q9P2F6 1191 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 ADAMTS1Q9UHI8 967 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 YIPF1Q9Y548 306 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 ZMYND10O75800 440 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 CSH1P0DML2 217 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 CSH2P0DML3 217 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 FOSL2P15408 326 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 CHRNB2P17787 502 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 GPD2P43304 727 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 PLA2G4AP47712 749 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 NAA35Q5VZE5 725 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 NUP93Q8N1F7 819 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 PPP1R13BQ96KQ4 1090 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 KCNK16Q96T55 309 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 CDX2Q99626 313 aaPredicted RBP17.79■□□□□ 0.44
CCM2-205ENST00000472223 CHP1Q99653 195 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 SMOQ99835 787 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 ZSWIM1Q9BR11 485 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 FBXO44Q9H4M3 255 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 PIDD1Q9HB75 910 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 CYLDQ9NQC7 956 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 COMMD8Q9NX08 183 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 PLXNA3P51805 1871 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 MYO7AQ13402 2215 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
CCM2-205ENST00000472223 PTPRDP23468 1912 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 PLEKP08567 350 aaPredicted RBP17.78■□□□□ 0.44
CCM2-205ENST00000472223 GZMAP12544 262 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 HOXA9P31269 272 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 HYAL1Q12794 435 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 CLEC16AQ2KHT3 1053 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 ACAD10Q6JQN1 1059 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 DENND5BQ6ZUT9 1274 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 Q7L0L9 218 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 PIGZQ86VD9 579 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 LRRC8AQ8IWT6 810 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 C1orf131Q8NDD1 294 aaKnown RBP17.78■□□□□ 0.44
CCM2-205ENST00000472223 GIPC2Q8TF65 315 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 SLC35F5Q8WV83 523 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 CPA5Q8WXQ8 436 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 MYLIPQ8WY64 445 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 KCTD13Q8WZ19 329 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 GOLGA1Q92805 767 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 TRIM11Q96F44 468 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 SFXN1Q9H9B4 322 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 UXTQ9UBK9 157 aaPredicted RBP17.78■□□□□ 0.44
CCM2-205ENST00000472223 TRANK1O15050 2925 aa17.78■□□□□ 0.44
CCM2-205ENST00000472223 RTN2O75298 545 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 SOAT2O75908 522 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 BEST1O76090 585 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 VNN2O95498 520 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 CYP1A1P04798 512 aaPredicted RBP17.77■□□□□ 0.44
CCM2-205ENST00000472223 CALB1P05937 261 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 HOXB8P17481 243 aaPredicted RBP17.77■□□□□ 0.44
CCM2-205ENST00000472223 CDH5P33151 784 aaPredicted RBP17.77■□□□□ 0.44
CCM2-205ENST00000472223 RGS7P49802 495 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 KIF11P52732 1056 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 NOMO3P69849 1222 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 IFRD2Q12894 506 aaPredicted RBP17.77■□□□□ 0.44
CCM2-205ENST00000472223 PDCLQ13371 301 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 ADGRE1Q14246 886 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 SKIV2LQ15477 1246 aaKnown RBP17.77■□□□□ 0.44
CCM2-205ENST00000472223 SLC18A3Q16572 532 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 PKDCCQ504Y2 493 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 CCDC122Q5T0U0 273 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 C10orf76Q5T2E6 689 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 TXLNBQ8N3L3 684 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 TTC9BQ8N6N2 239 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 SLITRK1Q96PX8 696 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 PPP1R9BQ96SB3 815 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 CRISPLD1Q9H336 500 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 CLDND1Q9NY35 253 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 STRIP2Q9ULQ0 834 aa17.77■□□□□ 0.44
CCM2-205ENST00000472223 MAGED2Q9UNF1 606 aaPredicted RBP17.77■□□□□ 0.44
CCM2-205ENST00000472223 ATG2AQ2TAZ0 1938 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 CCDC195A0A1B0GUA6 201 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 SLC38A8A6NNN8 435 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms