RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 PRUNE1Q86TP1 453 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 SNX27Q96L92 541 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 EBF2Q9HAK2 575 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 DDX56Q9NY93 547 aaKnown RBP18.24■□□□□ 0.51
RRP1-202ENST00000471909 DNPEPQ9ULA0 475 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 ZNF236Q9UL36 1845 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 hCG_1818297A0A087WSY0 165 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 PPEF2O14830 753 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 DARSP14868 501 aaKnown RBP18.24■□□□□ 0.51
RRP1-202ENST00000471909 IL1R2P27930 398 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 CDC42EP1Q00587 391 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 MFSD10Q14728 455 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 TFDP3Q5H9I0 405 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 ZNF365Q70YC5 407 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 POLNQ7Z5Q5 900 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 DYDC1Q8WWB3 177 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 KAT6AQ92794 2004 aa18.24■□□□□ 0.51
RRP1-202ENST00000471909 C3orf70A6NLC5 250 aaPredicted RBP18.23■□□□□ 0.51
RRP1-202ENST00000471909 SNX3O60493 162 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 KLRC2P26717 231 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 PTPN7P35236 360 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 SLC8A3P57103 927 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 ADAM17P78536 824 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 NOTUMQ6P988 496 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 C12orf29Q8N999 325 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 MCRS1Q96EZ8 462 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 UBOX5O94941 541 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 AUHQ13825 339 aaKnown RBP18.23■□□□□ 0.51
RRP1-202ENST00000471909 ZBTB6Q15916 424 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 SMTNL2Q2TAL5 461 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 CCDC89Q8N998 374 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 NSMCE1Q8WV22 266 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 DNAJB3Q8WWF6 145 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 NT5C1AQ9BXI3 368 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 CDC42EP4Q9H3Q1 356 aaKnown RBP18.23■□□□□ 0.51
RRP1-202ENST00000471909 ZWILCHQ9H900 591 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 ANAPC5Q9UJX4 755 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 DERAQ9Y315 318 aa18.23■□□□□ 0.51
RRP1-202ENST00000471909 NQO1P15559 274 aaKnown RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 IRF5Q13568 498 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 CCDC38Q502W7 563 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 KCNT1Q5JUK3 1230 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 DRICH1Q6PGQ1 229 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 LCLAT1Q6UWP7 414 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 TRMT10CQ7L0Y3 403 aaKnown RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 GSTA5Q7RTV2 222 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 GLIS1Q8NBF1 620 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 C18orf25Q96B23 403 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 DDX23Q9BUQ8 820 aaKnown RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 NXF3Q9H4D5 531 aaKnown RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 FAM124BQ9H5Z6 455 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 DOCK3Q8IZD9 2030 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 NCALDP61601 193 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 ZNF200P98182 395 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 CAV1Q03135 178 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 TNFAIP8L3Q5GJ75 292 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 GLRA4Q5JXX5 417 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 APBB1IPQ7Z5R6 666 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 USP6NLQ92738 828 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 PWWP2AQ96N64 755 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 MRPL45Q9BRJ2 306 aaKnown RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 C15orf41Q9Y2V0 281 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
RRP1-202ENST00000471909 SNX9Q9Y5X1 595 aa18.22■□□□□ 0.51
RRP1-202ENST00000471909 CITO14578 2027 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 HAS3O00219 553 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 TREHO43280 583 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 PFKMP08237 780 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 PSEN2P49810 448 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 MFSD5Q6N075 450 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 RASAL3Q86YV0 1011 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 TTC39CQ8N584 583 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 HAUS1Q96CS2 278 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 ECT2Q9H8V3 914 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 DNAJC17Q9NVM6 304 aaKnown RBP18.21■□□□□ 0.51
RRP1-202ENST00000471909 GJD2Q9UKL4 321 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 KIAA1257Q9ULG3 409 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 ZNF148Q9UQR1 794 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 L3MBTL1Q9Y468 752 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 PIK3R2O00459 728 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 ANP32DO95626 131 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 OAS1P00973 400 aaKnown RBP18.21■□□□□ 0.51
RRP1-202ENST00000471909 KRT7P08729 469 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 CYP2B6P20813 491 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 PAX7P23759 505 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 YARSP54577 528 aaKnown RBP18.21■□□□□ 0.51
RRP1-202ENST00000471909 KCNJ2P63252 427 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 BEX3Q00994 111 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 LMNB2Q03252 620 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 KIRREL3Q8IZU9 778 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 MAB21L3Q8N8X9 362 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 NME7Q9Y5B8 376 aa18.21■□□□□ 0.51
RRP1-202ENST00000471909 RECQL4O94761 1208 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms