RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ABHD16BQ9H3Z7 469 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CNOT10Q9H9A5 744 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 ROPN1Q9HAT0 212 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 CDHR5Q9HBB8 845 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 NINJ2Q9NZG7 142 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 WDR35Q9P2L0 1181 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 RSPH14Q9UHP6 348 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 DNPEPQ9ULA0 475 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 GNEQ9Y223 722 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 DRG1Q9Y295 367 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 DERAQ9Y315 318 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CITO14578 2027 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 MBLAC1A4D2B0 266 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 SLC15A5A6NIM6 579 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 A6NJR5 290 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 NDUFAB1O14561 156 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 DNALI1O14645 258 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 TJP3O95049 919 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 TTC4O95801 387 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 FAM107AO95990 144 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 F2P00734 622 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 IGHA2P01877 340 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PFKMP08237 780 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 KRT3P12035 628 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CD19P15391 556 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PSMA2P25787 234 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 GJC1P36383 396 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CETN2P41208 172 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 SSR1P43307 286 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 SEC24CP53992 1094 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 VCPP55072 806 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 CORO7P57737 925 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PSMC1P62191 440 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 ADAM17P78536 824 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 IFI35P80217 286 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 RBP5P82980 135 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 LMNB2Q03252 620 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CRHR2Q13324 411 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ACAP1Q15027 740 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ARHGEF6Q15052 776 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 TRIP13Q15645 432 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 ZBTB6Q15916 424 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 DGKDQ16760 1214 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 DCAF4L1Q3SXM0 396 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PKDCCQ504Y2 493 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 MORN1Q5T089 497 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ERMARDQ5T6L9 678 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 IZUMO3Q5VZ72 239 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 TRNP1Q6NT89 227 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 LCLAT1Q6UWP7 414 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CYP4V2Q6ZWL3 525 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 PRUNE1Q86TP1 453 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ZCCHC9Q8N567 271 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 GLIS1Q8NBF1 620 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CMASQ8NFW8 434 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 SLC35B2Q8TB61 432 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CCHCR1Q8TD31 782 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ZNF473Q8WTR7 871 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 ATXN2LQ8WWM7 1075 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 NLRP7Q8WX94 980 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 KAT2BQ92831 832 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 HPDLQ96IR7 371 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 SNX27Q96L92 541 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CCDC114Q96M63 670 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PWWP2AQ96N64 755 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 SCLT1Q96NL6 688 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ACAP3Q96P50 834 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CCT8L2Q96SF2 557 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PARK7Q99497 189 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 FOXP3Q9BZS1 431 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CXCL16Q9H2A7 254 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 RABEP2Q9H5N1 569 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 CCDC134Q9H6E4 229 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 PLEKHA5Q9HAU0 1116 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 METTL5Q9NRN9 209 aaKnown RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 DPP3Q9NY33 737 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 EURLQ9NYK6 297 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 BCCIPQ9P287 314 aaKnown RBP eCLIP6.75□□□□□ -1.33
SPEN-204ENST00000471538 ANAPC5Q9UJX4 755 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 GGA2Q9UJY4 613 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 BARX2Q9UMQ3 279 aaPredicted RBP6.75□□□□□ -1.33
SPEN-204ENST00000471538 AGAP1Q9UPQ3 857 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 NME7Q9Y5B8 376 aa6.75□□□□□ -1.33
SPEN-204ENST00000471538 SMIM35A0A1B0GVV1 85 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 GMNCA6NCL1 334 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 RRN3P2A6NIE6 340 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 GOLGA8SH3BPF8 625 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 M0QYV0 167 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 MYO1CO00159 1063 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 HAS3O00219 553 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 EBAG9O00559 213 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 SOX1O00570 391 aaPredicted RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 RASGRF2O14827 1237 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 PPEF2O14830 753 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 RGS16O15492 202 aaPredicted RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 ENDOD1O94919 500 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 ITGAVP06756 1048 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 KRT7P08729 469 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 ABHD2P08910 425 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms