RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 STYXL1Q9Y6J8 313 aa9.8□□□□□ -0.84
CPSF4-211ENST00000471455 ZNF638Q14966 1978 aaKnown RBP9.8□□□□□ -0.84
CPSF4-211ENST00000471455 TCHHQ07283 1943 aa9.8□□□□□ -0.84
CPSF4-211ENST00000471455 SCN1AP35498 2009 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 TM4SF5O14894 197 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 NOL4O94818 638 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 KCNK5O95279 499 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 NFATC1O95644 943 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CAVIN2O95810 425 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 LDHAP00338 332 aaKnown RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 ARSAP15289 507 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 HMGA1P17096 107 aaKnown RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 PFKLP17858 780 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 PLCG1P19174 1290 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 NMT1P30419 496 aaKnown RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 GBP1P32455 592 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 GJA4P35212 333 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 TXLNAP40222 546 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 GALK1P51570 392 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CREB5Q02930 508 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 PSMD2Q13200 908 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 DMC1Q14565 340 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 MCM6Q14566 821 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 RABEP1Q15276 862 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CCDC6Q16204 474 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 USP39Q53GS9 565 aaKnown RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 INTS6LQ5JSJ4 861 aaKnown RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 LMBRD2Q68DH5 695 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 TXNDC8Q6A555 127 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 SLC39A4Q6P5W5 647 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 PKN3Q6P5Z2 889 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 LRRTM3Q86VH5 581 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 SPATA2LQ8IUW3 424 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 LRRC52Q8N7C0 313 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 ARMC2Q8NEN0 867 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 RPLP0P6Q8NHW5 317 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 FUBP3Q96I24 572 aaKnown RBP eCLIP9.79□□□□□ -0.84
CPSF4-211ENST00000471455 MYRFLQ96LU7 910 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CDK15Q96Q40 435 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 PI4K2AQ9BTU6 479 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 ECT2Q9H8V3 914 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 TRPC7Q9HCX4 862 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CCL26Q9Y258 94 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 CHD6Q8TD26 2715 aa9.79□□□□□ -0.84
CPSF4-211ENST00000471455 KHNYNO15037 678 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 ALDH1A2O94788 518 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 TCF3P15923 654 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 GAP43P17677 238 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 POLR2BP30876 1174 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 DPP6P42658 865 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 LHX1P48742 406 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 NOVA1P51513 510 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 DGKEP52429 567 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 TFAMQ00059 246 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 USP4Q13107 963 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 ALCAMQ13740 583 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 ZNF77Q15935 545 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 CFAP221Q4G0U5 840 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 PSAPL1Q6NUJ1 521 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 CYP2U1Q7Z449 544 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 BRAPQ7Z569 592 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 TMEM150AQ86TG1 271 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 BPHLQ86WA6 291 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 PDCL2Q8N4E4 241 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 TOP6BLQ8N6T0 577 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 TTC16Q8NEE8 873 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 FAM174AQ8TBP5 190 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 ACCSQ96QU6 501 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 DUSP15Q9H1R2 295 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 MRPL44Q9H9J2 332 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 BLOC1S4Q9NUP1 217 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 DDX43Q9NXZ2 648 aaKnown RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 RBAKQ9NYW8 714 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-211ENST00000471455 STK17AQ9UEE5 414 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 CCDC39Q9UFE4 941 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 DENND4CQ5VZ89 1909 aa9.78□□□□□ -0.84
CPSF4-211ENST00000471455 ANK1P16157 1881 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 BCLAF3A2AJT9 711 aaKnown RBP9.77□□□□□ -0.85
CPSF4-211ENST00000471455 TMEM8BA6NDV4 472 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 OTOL1A6NHN0 477 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-211ENST00000471455 ANKRD63C9JTQ0 380 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 SLC9A3R1O14745 358 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-211ENST00000471455 ITGB3P05106 788 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 PROS1P07225 676 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 ANXA13P27216 316 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 GJB2P29033 226 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 MAGEA11P43364 429 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 RBP5P82980 135 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 DDR2Q16832 855 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 ZC2HC1CQ53FD0 456 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-211ENST00000471455 ZNF720Q7Z2F6 126 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 BRSK2Q8IWQ3 736 aa9.77□□□□□ -0.85
CPSF4-211ENST00000471455 SCN4BQ8IWT1 228 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms