RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 EME1Q96AY2 570 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 CHORDC1Q9UHD1 332 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 TRDMT1O14717 391 aaKnown RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 FSCN2O14926 492 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 TSPY1Q01534 308 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 POU5F1BQ06416 359 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF268Q14587 947 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ZCWPW2Q504Y3 356 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 LRRC8EQ6NSJ5 796 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 RFX8Q6ZV50 586 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 TFB1MQ8WVM0 346 aaKnown RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 PPP2R3CQ969Q6 453 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 CCDC126Q96EE4 140 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 PLEKHA5Q9HAU0 1116 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 RNPEPL1Q9HAU8 725 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 MARCOQ9UEW3 520 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 DTNAQ9Y4J8 743 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 MYH6P13533 1939 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SDR42E2A6NKP2 422 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ABLIM1O14639 778 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SUPT20HL2P0C7V6 817 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ADORA2BP29275 332 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 PRAMEP78395 509 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 CCDC15Q0P6D6 951 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 NOP9Q86U38 636 aaKnown RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 RYBPQ8N488 228 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 IFT43Q96FT9 208 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 CHCHD3Q9NX63 227 aaKnown RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 CYP39A1Q9NYL5 469 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 CTNNAL1Q9UBT7 734 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ADGRA3Q8IWK6 1321 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 TNPO2O14787 897 aaKnown RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 LIN7AO14910 233 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ANGPT2O15123 496 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SRP72O76094 671 aaKnown RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SLC25A27O95847 323 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ABL1P00519 1130 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 PNPLA4P41247 253 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SERPINB8P50452 374 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 PARP6Q2NL67 630 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 AASDHQ4L235 1098 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 PRELID2Q8N945 189 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 ETNPPLQ8TBG4 499 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 HIC2Q96JB3 615 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 MMP19Q99542 508 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 SH2D3AQ9BRG2 576 aa10.94□□□□□ -0.66
RRP1B-202ENST00000470886 COL1A1P02452 1464 aaPredicted RBP10.94□□□□□ -0.66
RRP1B-202ENST00000470886 NFIAQ12857 509 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 OVGP1Q12889 678 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 USP10Q14694 798 aaKnown RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 CBWD6Q4V339 395 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 CBWD3Q5JTY5 395 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 CBWD5Q5RIA9 395 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ACTL9Q8TC94 416 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF75CPQ92670 426 aaPredicted RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 RMDN2Q96LZ7 410 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 TASP1Q9H6P5 420 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 UBAP1Q9NZ09 502 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 WNT7AO00755 349 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 RPS12P25398 132 aaKnown RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 GTF2BQ00403 316 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 RIN3Q8TB24 985 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 GTF3C2Q8WUA4 911 aaPredicted RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF408Q9H9D4 720 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 GID8Q9NWU2 228 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 FAM8A1Q9UBU6 413 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 BLOC1S6Q9UL45 172 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 AFF2P51816 1311 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 EEF2KO00418 725 aaKnown RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 EIF4BP23588 611 aaKnown RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 CDK16Q00536 496 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 FLOT2Q14254 428 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 APPL2Q8NEU8 664 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 SHC3Q92529 594 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 HPDLQ96IR7 371 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 KLHL4Q9C0H6 718 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 FAM49AQ9H0Q0 323 aaPredicted RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 MRPL46Q9H2W6 279 aaKnown RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 EFCAB1Q9HAE3 211 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 KCNK4Q9NYG8 393 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 CCDC88AQ3V6T2 1871 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ZNF263O14978 683 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 PSMD10O75832 226 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ENO3P13929 434 aaPredicted RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 PECAM1P16284 738 aaPredicted RBP10.93□□□□□ -0.66
RRP1B-202ENST00000470886 SLC26A2P50443 739 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 SMTNL2Q2TAL5 461 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 MDH1BQ5I0G3 518 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 MROH9Q5TGP6 573 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 MPZL3Q6UWV2 235 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ZPBP2Q6X784 338 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 MYLK2Q9H1R3 596 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 SNX9Q9Y5X1 595 aa10.93□□□□□ -0.66
RRP1B-202ENST00000470886 ITGB4P16144 1822 aa10.92□□□□□ -0.66
RRP1B-202ENST00000470886 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
RRP1B-202ENST00000470886 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms