RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 RAB21Q9UL25 225 aa9.39□□□□□ -0.91
LMCD1-207ENST00000470776 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
LMCD1-207ENST00000470776 ALG6Q9Y672 507 aa9.39□□□□□ -0.91
LMCD1-207ENST00000470776 BRCA2P51587 3418 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CEP290O15078 2479 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 HHLA1C9JL84 531 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 H7C4K7 107 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 MYO1FO00160 1098 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ENC1O14682 589 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 PAPSS1O43252 624 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 PROSCO94903 275 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 FTCDO95954 541 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 LINC00271P0C7V0 271 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 NPR3P17342 541 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CTNNA2P26232 953 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ADORA2BP29275 332 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SLC1A1P43005 524 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SLC8A3P57103 927 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TSPY1Q01534 308 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SMARCB1Q12824 385 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 NAA30Q147X3 362 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ACAP1Q15027 740 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 RPS6KA1Q15418 735 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CCDC142Q17RM4 750 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CFAP221Q4G0U5 840 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 C2CD6Q53TS8 623 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 RAB41Q5JT25 222 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 LLGL2Q6P1M3 1020 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CC2D1AQ6P1N0 951 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 DNAJC24Q6P3W2 148 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CLEC20AQ6ZU45 233 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ANKS3Q6ZW76 656 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 OTOP2Q7RTS6 562 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 HDXQ7Z353 690 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 PEX26Q7Z412 305 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 PIGZQ86VD9 579 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TMEM173Q86WV6 379 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SP7Q8TDD2 431 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CD101Q93033 1021 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 MYLPFQ96A32 169 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SMARCD1Q96GM5 515 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 FUBP3Q96I24 572 aaKnown RBP eCLIP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ZNF558Q96NG5 402 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TMEM209Q96SK2 561 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SMOQ99835 787 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 PNPLA8Q9NP80 782 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TMLHEQ9NVH6 421 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 RNF14Q9UBS8 474 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TJP2Q9UDY2 1190 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 CHORDC1Q9UHD1 332 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 IP6K2Q9UHH9 426 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 ANAPC7Q9UJX3 599 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TMEM59LQ9UK28 342 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 PRDM4Q9UKN5 801 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 HYOU1Q9Y4L1 999 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 BACE2Q9Y5Z0 518 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 SAR1BQ9Y6B6 198 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 MRPL42Q9Y6G3 142 aaKnown RBP9.38□□□□□ -0.91
LMCD1-207ENST00000470776 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
LMCD1-207ENST00000470776 TDRD15B5MCY1 1934 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 TARSL2A2RTX5 802 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 MIF4GDA9UHW6 222 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 NT5C1B-RDH14C9J2C7 533 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 E5RJQ4 531 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 CLDN5O00501 218 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 DDX3YO15523 660 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 BEST1O76090 585 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 FAM200BP0CF97 657 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 KRT3P12035 628 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 COMTP21964 271 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 MAGEA11P43364 429 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 RPL7AP62424 266 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 OGDHQ02218 1023 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 GPR17Q13304 367 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 MESDQ14696 234 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 USP41Q3LFD5 358 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 CYP4A22Q5TCH4 519 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 ZNF280DQ6N043 979 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 OLFML1Q6UWY5 402 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 FAM183BPQ6ZVS7 135 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 SLC26A9Q7LBE3 791 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 DAAM2Q86T65 1068 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 COLGALT1Q8NBJ5 622 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 C2orf15Q8WU43 125 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 PIK3R5Q8WYR1 880 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 CLP1Q92989 425 aaKnown RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 PBKQ96KB5 322 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms