RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 BATF3Q9NR55 127 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 METTL5Q9NRN9 209 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 HAO1Q9UJM8 370 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 FZD1Q9UP38 647 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 DIAPH2O60879 1101 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 PEX11AO75192 247 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 RPSAP08865 295 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 GNAZP19086 355 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 MIPP30301 263 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 ETV4P43268 484 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 RASSF2P50749 326 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 NEK3P51956 506 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 SLC18A2Q05940 514 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 NOMO1Q15155 1222 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 CHSY1Q86X52 802 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 SLC4A11Q8NBS3 891 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 FAM13CQ8NE31 585 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 CXorf38Q8TB03 319 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 SLC16A10Q8TF71 515 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 TBC1D10AQ9BXI6 508 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 VRTNQ9H8Y1 702 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 RSAD1Q9HA92 442 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 E7ENQ6 273 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 IL18RAPO95256 599 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 SRGAP2CP0DJJ0 459 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 CD19P15391 556 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 RXRBP28702 533 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 STIP1P31948 543 aaKnown RBP14.28□□□□□ -0.12
BRCA1-209ENST00000470026 CLNS1AP54105 237 aaKnown RBP14.28□□□□□ -0.12
BRCA1-209ENST00000470026 EIF3EP60228 445 aaKnown RBP14.28□□□□□ -0.12
BRCA1-209ENST00000470026 KCNJ11Q14654 390 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 WASHC2DQ5SRD0 308 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 ATF7IP2Q5U623 682 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 CYP4V2Q6ZWL3 525 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-209ENST00000470026 PALM2Q8IXS6 379 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 EMC1Q8N766 993 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 ENDOVQ8N8Q3 282 aaKnown RBP14.28□□□□□ -0.12
BRCA1-209ENST00000470026 SLC44A1Q8WWI5 657 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 MRRFQ96E11 262 aaKnown RBP14.28□□□□□ -0.12
BRCA1-209ENST00000470026 CYTH2Q99418 400 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 RNPEPL1Q9HAU8 725 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 PNPLA8Q9NP80 782 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 TEX264Q9Y6I9 313 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 PTPRFP10586 1907 aa14.28□□□□□ -0.12
BRCA1-209ENST00000470026 FZD9O00144 591 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 CILPO75339 1184 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 SPAG6O75602 509 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 TGDSO95455 350 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 C1QAP02745 245 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 RBP3P10745 1247 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 PTPN4P29074 926 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 RAP1GAPP47736 663 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 PTPN11Q06124 597 aaPredicted RBP14.27□□□□□ -0.12
BRCA1-209ENST00000470026 TAF5Q15542 800 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 BBS9Q3SYG4 887 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.12
BRCA1-209ENST00000470026 ZNF667Q5HYK9 610 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 PRAMEF18Q5VWM3 479 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 FYB2Q5VWT5 728 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 EEF1DP3Q658K8 133 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 PLPPR4Q7Z2D5 763 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 CLNKQ7Z7G1 428 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 RFX6Q8HWS3 928 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 IGDCC3Q8IVU1 814 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 C1orf127Q8N9H9 656 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 KCTD6Q8NC69 237 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 TWNKQ96RR1 684 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 GPR20Q99678 358 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 ELOVL4Q9GZR5 314 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 BTBD7Q9P203 1132 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 CNTN3Q9P232 1028 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 SLC17A7Q9P2U7 560 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 USP18Q9UMW8 372 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.27□□□□□ -0.12
BRCA1-209ENST00000470026 TNFSF13BQ9Y275 285 aa14.27□□□□□ -0.12
BRCA1-209ENST00000470026 MCF2LO15068 1137 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 DNAJC6O75061 913 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 CBX6O95503 412 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 TROVE2P10155 538 aaKnown RBP eCLIP14.27□□□□□ -0.13
BRCA1-209ENST00000470026 CALB2P22676 271 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 GPD2P43304 727 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 TAF1BQ53T94 588 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-209ENST00000470026 LRRC71Q8N4P6 559 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 CEP120Q8N960 986 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.27□□□□□ -0.13
BRCA1-209ENST00000470026 CFAP61Q8NHU2 1237 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 RTP4Q96DX8 246 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 PEBP4Q96S96 227 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 ADAM33Q9BZ11 813 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 CDT1Q9H211 546 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 MANSC1Q9H8J5 431 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 DONSONQ9NYP3 566 aa14.27□□□□□ -0.13
BRCA1-209ENST00000470026 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
BRCA1-209ENST00000470026 IQANK1A0A1B0GTG1 560 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 TCRBV9S1A1TA0A576 114 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms