RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ASB16Q96NS5 453 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 DDX43Q9NXZ2 648 aaKnown RBP18.75■□□□□ 0.59
MRPL28-208ENST00000469744 ECI2O75521 394 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 MICAL2O94851 1124 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 IPO7O95373 1038 aaKnown RBP18.74■□□□□ 0.59
MRPL28-208ENST00000469744 TNNI1P19237 187 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 KCNMA1Q12791 1236 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 PSMD6Q15008 389 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 DNAJB7Q7Z6W7 309 aaPredicted RBP18.74■□□□□ 0.59
MRPL28-208ENST00000469744 GPIHBP1Q8IV16 184 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 ADGRF2Q8IZF7 708 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 LEMD2Q8NC56 503 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 ZSCAN18Q8TBC5 510 aaPredicted RBP18.74■□□□□ 0.59
MRPL28-208ENST00000469744 PSMG2Q969U7 264 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 FNBP1Q96RU3 617 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 FOXQ1Q9C009 403 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 MMRN2Q9H8L6 949 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 NHEJ1Q9H9Q4 299 aaPredicted RBP18.74■□□□□ 0.59
MRPL28-208ENST00000469744 LZTFL1Q9NQ48 299 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 GDAP2Q9NXN4 497 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 CGNQ9P2M7 1197 aaKnown RBP18.74■□□□□ 0.59
MRPL28-208ENST00000469744 REXO2Q9Y3B8 237 aaKnown RBP18.74■□□□□ 0.59
MRPL28-208ENST00000469744 NCANO14594 1321 aa18.74■□□□□ 0.59
MRPL28-208ENST00000469744 EXOC3O60645 756 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
MRPL28-208ENST00000469744 VIPR2P41587 438 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 CASP4P49662 377 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 TSPY1Q01534 308 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 SOWAHAQ2M3V2 549 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 GAREM2Q75VX8 874 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 TRAPPC11Q7Z392 1133 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 ALYREFQ86V81 257 aaKnown RBP18.73■□□□□ 0.59
MRPL28-208ENST00000469744 DCP1BQ8IZD4 617 aaKnown RBP18.73■□□□□ 0.59
MRPL28-208ENST00000469744 EHBP1Q8NDI1 1231 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 GOLGA5Q8TBA6 731 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 BAP1Q92560 729 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 SMARCD2Q92925 531 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 ELSPBP1Q96BH3 223 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 CGRRF1Q99675 332 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 PI4K2AQ9BTU6 479 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 MKNK1Q9BUB5 465 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 ZFP14Q9HCL3 533 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 ARMCX3Q9UH62 379 aaPredicted RBP18.73■□□□□ 0.59
MRPL28-208ENST00000469744 MRFAP1Q9Y605 127 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 VPS13AQ96RL7 3174 aa18.73■□□□□ 0.59
MRPL28-208ENST00000469744 LCA5LO95447 670 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 NR3C1P04150 777 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 DCNP07585 359 aaKnown RBP18.72■□□□□ 0.59
MRPL28-208ENST00000469744 HAPLN1P10915 354 aaPredicted RBP18.72■□□□□ 0.59
MRPL28-208ENST00000469744 GABRR2P28476 465 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 TUFMP49411 452 aaKnown RBP18.72■□□□□ 0.59
MRPL28-208ENST00000469744 GPR15P49685 360 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 SNRPFP62306 86 aaKnown RBP18.72■□□□□ 0.59
MRPL28-208ENST00000469744 MYO1EQ12965 1108 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 SDHAF4Q5VUM1 108 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 VITQ6UXI7 678 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 C12orf56Q8IXR9 622 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 TMEM86AQ8N2M4 240 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 SPPL2BQ8TCT7 592 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 PLEKHO2Q8TD55 490 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 TMEM174Q8WUU8 243 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 ZNF516Q92618 1163 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 HSFX1Q9UBD0 423 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 ASB3Q9Y575 518 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 PCDHB5Q9Y5E4 795 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 MIA3Q5JRA6 1907 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 TICRRQ7Z2Z1 1910 aa18.72■□□□□ 0.59
MRPL28-208ENST00000469744 SSU72P8A0A1W2PR75 194 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 EFCAB8A8MWE9 144 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 LRRN2O75325 713 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 CST3P01034 146 aaPredicted RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 EPB41P11171 864 aaKnown RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 CD72P21854 359 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 TUBB4BP68371 445 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 MYL7Q01449 175 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 VEPH1Q14D04 833 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 MLF2Q15773 248 aaPredicted RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 SLC44A4Q53GD3 710 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 INTS6LQ5JSJ4 861 aaKnown RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 ZNF569Q5MCW4 686 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 ITIH5Q86UX2 942 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 TXLNBQ8N3L3 684 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 TOP6BLQ8N6T0 577 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 MNS1Q8NEH6 495 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 C2orf15Q8WU43 125 aaKnown RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 KBTBD7Q8WVZ9 684 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 ATOH1Q92858 354 aaPredicted RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 ACBD6Q9BR61 282 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 TSGA10Q9BZW7 698 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 ATXN3LQ9H3M9 355 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 PLCB1Q9NQ66 1216 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 FAM207AQ9NSI2 230 aaPredicted RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 GTF3C4Q9UKN8 822 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 GTPBP10A4D1E9 387 aaKnown RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 CTAGE9A4FU28 777 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 ATP2C2O75185 946 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 PSMC1P62191 440 aaKnown RBP18.71■□□□□ 0.59
MRPL28-208ENST00000469744 CYP4F8P98187 520 aa18.71■□□□□ 0.59
MRPL28-208ENST00000469744 KCNH2Q12809 1159 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms