RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 LPIN2Q92539 896 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 FUBP1Q96AE4 644 aaKnown RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 LENG9Q96B70 501 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 PTCD3Q96EY7 689 aaKnown RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 ZNF503Q96F45 646 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SNX27Q96L92 541 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 NELL2Q99435 816 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 EIF2AQ9BY44 585 aaKnown RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 ACTRT3Q9BYD9 372 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 TPSD1Q9BZJ3 242 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.91□□□□□ -1.624e-7■■■■■ 28.3
VPS8-220ENST00000469713 RGL1Q9NZL6 768 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 AQP7P3A6NL99 342 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 HNRNPDLO14979 420 aaKnown RBP4.9□□□□□ -1.63
VPS8-220ENST00000469713 PPM1DO15297 605 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 KCNQ3O43525 872 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 ITGAMP11215 1152 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 PDIA3P30101 505 aaKnown RBP4.9□□□□□ -1.63
VPS8-220ENST00000469713 ATICP31939 592 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 CHKAP35790 457 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 PDE6CP51160 858 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 ICA1Q05084 483 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 GRM1Q13255 1194 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 RAB30Q15771 203 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 DEPDC1Q5TB30 811 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 FNDC7Q5VTL7 733 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 PGBD2Q6P3X8 592 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 KCNV1Q6PIU1 500 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 KIAA0408Q6ZU52 694 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 CERS3Q8IU89 383 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 B3GALNT2Q8NCR0 500 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 ATG4AQ8WYN0 398 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 HAS1Q92839 578 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 MLST8Q9BVC4 326 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 PCDHAC1Q9H158 963 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 FAM83DQ9H4H8 585 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 TM7SF3Q9NS93 570 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 TBCCD1Q9NVR7 557 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 TESQ9UGI8 421 aaKnown RBP4.9□□□□□ -1.63
VPS8-220ENST00000469713 HPSEQ9Y251 543 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 REXO2Q9Y3B8 237 aaKnown RBP4.9□□□□□ -1.63
VPS8-220ENST00000469713 HS3ST4Q9Y661 456 aa4.9□□□□□ -1.63
VPS8-220ENST00000469713 GOLGA6L3A6NEY3 463 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 AQP12BA6NM10 295 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 CD3EAPO15446 510 aaKnown RBP4.89□□□□□ -1.63
VPS8-220ENST00000469713 ERBB2P04626 1255 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 RHOP08100 348 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 SRGNP10124 158 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 HGFP14210 728 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 PTGS2P35354 604 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 GALNT1Q10472 559 aaPredicted RBP4.89□□□□□ -1.63
VPS8-220ENST00000469713 BLMHQ13867 455 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 CCDC38Q502W7 563 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 MIIPQ5JXC2 388 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 MANEALQ5VSG8 457 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 RAP1GAP2Q684P5 730 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 USP17L6PQ6QN14 398 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 MRGPREQ86SM8 312 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 CCDC28AQ8IWP9 274 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 MYCBPAPQ8TBZ2 947 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 PROKR1Q8TCW9 393 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 ZNF384Q8TF68 577 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 WDR11Q9BZH6 1224 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 TRIM5Q9C035 493 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 OBP2BQ9NPH6 170 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 CASS4Q9NQ75 786 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 ZMYND8Q9ULU4 1186 aaPredicted RBP4.89□□□□□ -1.63
VPS8-220ENST00000469713 SNX14Q9Y5W7 946 aa4.89□□□□□ -1.63
VPS8-220ENST00000469713 PIPSLA2A3N6 862 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 LGALS16A8MUM7 142 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 PIP5K1BO14986 540 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 PIP5K1CO60331 668 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 PPFIA4O75335 1185 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 SKAP2O75563 359 aaPredicted RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 EGR2P11161 476 aaPredicted RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 IDEP14735 1019 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 PECAM1P16284 738 aaPredicted RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 EGR1P18146 543 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 HALP42357 657 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 EIF2B5Q13144 721 aaKnown RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 PFKFB4Q16877 469 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 LY6KQ17RY6 165 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 LSM12Q3MHD2 195 aaKnown RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 ARHGAP15Q53QZ3 475 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 INO80DQ53TQ3 878 aaPredicted RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 CERCAMQ5T4B2 595 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 TMTC4Q5T4D3 741 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 FAXCQ5TGI0 409 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 VWA1Q6PCB0 445 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 ABRAQ8N0Z2 381 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 LNX2Q8N448 690 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 TOR1AIP2Q8NFQ8 470 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 OSCP1Q8WVF1 389 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 ZBTB45Q96K62 511 aaPredicted RBP4.88□□□□□ -1.63
VPS8-220ENST00000469713 SERHL2Q9H4I8 314 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 NECTIN3Q9NQS3 549 aa4.88□□□□□ -1.63
VPS8-220ENST00000469713 MORC2Q9Y6X9 1032 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms