RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 HDCP19113 662 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 HOXA6P31267 233 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 MAPRE1Q15691 268 aaKnown RBP26.13■■□□□ 1.77
PTCH1-210ENST00000468211 FSIP1Q8NA03 581 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 OR6B3Q8NGW1 331 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 EZH1Q92800 747 aaPredicted RBP26.13■■□□□ 1.77
PTCH1-210ENST00000468211 ELMO3Q96BJ8 720 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 CHAMP1Q96JM3 812 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 LINC00597Q9H2U6 94 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 RCOR1Q9UKL0 485 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 NCOR2Q9Y618 2525 aa26.13■■□□□ 1.77
PTCH1-210ENST00000468211 F8VP50 259 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 ACTN4O43707 911 aaKnown RBP26.12■■□□□ 1.77
PTCH1-210ENST00000468211 RNF40O75150 1001 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 RETP07949 1114 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 EML3Q32P44 896 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 DENND5BQ6ZUT9 1274 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 WDR5BQ86VZ2 330 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 KIAA0895Q8NCT3 520 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 TTLL2Q9BWV7 592 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 NXF1Q9UBU9 619 aaKnown RBP26.12■■□□□ 1.77
PTCH1-210ENST00000468211 SPTBN2O15020 2390 aa26.12■■□□□ 1.77
PTCH1-210ENST00000468211 MYOFQ9NZM1 2061 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 CLDN5O00501 218 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 EXOC3O60645 756 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 STAU1O95793 577 aaKnown RBP26.11■■□□□ 1.77
PTCH1-210ENST00000468211 PDIA4P13667 645 aaKnown RBP26.11■■□□□ 1.77
PTCH1-210ENST00000468211 PTPN1P18031 435 aaKnown RBP26.11■■□□□ 1.77
PTCH1-210ENST00000468211 CNR2P34972 360 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 TNNC1P63316 161 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 LMNB2Q03252 620 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 STK4Q13043 487 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 KCNB1Q14721 858 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 ATL3Q6DD88 541 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 CPA6Q8N4T0 437 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 P2RY13Q9BPV8 354 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 ZNF518BQ9C0D4 1074 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 CGNQ9P2M7 1197 aaKnown RBP26.11■■□□□ 1.77
PTCH1-210ENST00000468211 ARHGAP26Q9UNA1 814 aa26.11■■□□□ 1.77
PTCH1-210ENST00000468211 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.11■■□□□ 1.77
PTCH1-210ENST00000468211 SLFN14P0C7P3 912 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 ANXA13P27216 316 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 IFNAR2P48551 515 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 ATXN1P54253 815 aaKnown RBP26.1■■□□□ 1.77
PTCH1-210ENST00000468211 TRPC3Q13507 836 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 TDRD10Q5VZ19 366 aaKnown RBP26.1■■□□□ 1.77
PTCH1-210ENST00000468211 FAM160A2Q8N612 972 aaPredicted RBP26.1■■□□□ 1.77
PTCH1-210ENST00000468211 PAGE5Q96GU1 130 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 C8orf48Q96LL4 319 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 CEP295NLQ96MC4 621 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 B3GNT5Q9BYG0 378 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 RNF38Q9H0F5 515 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 SMYD3Q9H7B4 428 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 CFAP45Q9UL16 551 aa26.1■■□□□ 1.77
PTCH1-210ENST00000468211 ZNF840PA6NDX5 716 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 LRRIQ3A6PVS8 624 aaPredicted RBP26.09■■□□□ 1.77
PTCH1-210ENST00000468211 TRIM66O15016 1216 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 FAM163BP0C2L3 166 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 TCF3P15923 654 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 CDH8P55286 799 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 NOP14P78316 857 aaKnown RBP26.09■■□□□ 1.77
PTCH1-210ENST00000468211 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.09■■□□□ 1.77
PTCH1-210ENST00000468211 CEP57L1Q8IYX8 460 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 ATP2A3Q93084 1043 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 TRPM5Q9NZQ8 1165 aa26.09■■□□□ 1.77
PTCH1-210ENST00000468211 MYH10P35580 1976 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 A8MXQ7 604 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 PRR5-ARHGAP8B1AHC4 643 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 DRD1P21728 446 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 ATICP31939 592 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 RAP1GAPP47736 663 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 ARHGAP8P85298 464 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 AMPD2Q01433 879 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 KMT5BQ4FZB7 885 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 CEP68Q76N32 757 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 B3GALNT2Q8NCR0 500 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 PARD3BQ8TEW8 1205 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 SEMA4GQ9NTN9 838 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 DMAC2Q9NW81 257 aa26.08■■□□□ 1.77
PTCH1-210ENST00000468211 A0A1B0GVL5 298 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 ANTXRLA6NF34 631 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 LEFTY2O00292 366 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 PHACTR2O75167 634 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 VNN1O95497 513 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 C4BPAP04003 597 aaKnown RBP26.07■■□□□ 1.76
PTCH1-210ENST00000468211 DLG4P78352 724 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 CLDN10P78369 228 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 TAF10Q12962 218 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 CD101Q93033 1021 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 SYAP1Q96A49 352 aaPredicted RBP26.07■■□□□ 1.76
PTCH1-210ENST00000468211 SDCBP2Q9H190 292 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 KCTD10Q9H3F6 313 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 CDV3Q9UKY7 258 aaKnown RBP26.07■■□□□ 1.76
PTCH1-210ENST00000468211 SLC8A2Q9UPR5 921 aa26.07■■□□□ 1.76
PTCH1-210ENST00000468211 SCAMP3O14828 347 aaKnown RBP26.06■■□□□ 1.76
PTCH1-210ENST00000468211 ATG13O75143 517 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 PFKFB1P16118 471 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 IFRD2Q12894 506 aaPredicted RBP26.06■■□□□ 1.76
PTCH1-210ENST00000468211 BIRC3Q13489 604 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 GAB4Q2WGN9 574 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms